DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hcs and SPBC30D10.07c

DIOPT Version :9

Sequence 1:NP_001287175.1 Gene:Hcs / 40659 FlyBaseID:FBgn0037332 Length:1047 Species:Drosophila melanogaster
Sequence 2:NP_596278.1 Gene:SPBC30D10.07c / 2540476 PomBaseID:SPBC30D10.07c Length:631 Species:Schizosaccharomyces pombe


Alignment Length:699 Identity:177/699 - (25%)
Similarity:283/699 - (40%) Gaps:177/699 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   455 LNVLVYSDSASARESTLATLQQLLERNVYTIYPLMPQQAA---QKYWTEQTALLVV--------C 508
            :|||:|:.:.:::...|.|.|.||. .|..:|.:....|:   ::.|...|||||:        |
pombe     1 MNVLIYNGNGASKICLLRTFQSLLP-FVVPLYAMRFVDASTLEKEPWPASTALLVMPGGRDMGYC 64

  Fly   509 GSVAHGIGQILVDYFLQGGKVLSLC------SDILHFVLPNYRTAEVREHELVQF---------- 557
            .|....|.:.:.|:..:||..|.||      |.::.|.:|:.....|.:.:|..|          
pombe    65 SSFNETIYRKITDFVKRGGAYLGLCAGGYFGSAVVDFRMPDSDLNVVGKRKLQFFPGTCAGPTFP 129

  Fly   558 -----SYDKWQRVKMMHHIFCYQPSPVKKHFSTDSEES---TKSHSRKPALVCPRSMELKDLAGH 614
                 |.|..:|..::  :...|.|||..|...:...|   |:::|                   
pombe   130 GFTYDSEDGARRASII--VDGMQSSPVHTHIYFNGGGSFLETENYS------------------- 173

  Fly   615 SHNLDVHVLGTEETWNTPSLMLAKSLQSGGKAVFSQVHLEMNPSEFESDETKYSILKQNERTRLE 679
              |:.| |...:||....|..:.......|..|.:.:|.|.      |.|....:.|::|:||||
pombe   174 --NVKV-VARYQETDFEKSAAIIYVKVGKGNVVLTGIHPEF------SAEGSPILDKRDEKTRLE 229

  Fly   680 IFADLLGKYLDVQVRGGDGVDQPQPGVVYKHAYFLGRHEAKFELLEK------------------ 726
            :.:.:| |.|.::| ..|.....||.:..:: .|....|.| ..:||                  
pombe   230 LLSYIL-KLLGLKV-PKDTSKCGQPTLTDQY-LFPNNVETK-RFIEKALTNKVKNQDEDTLYTFQ 290

  Fly   727 -----------------LRLRCSGSDNVI--------------ATPNLTMKFCGKDDKPPVANNN 760
                             :....|.|||.|              |.|:..::...|          
pombe   291 FSDISSEIPEHQLANLDISADLSDSDNEIVKIWYGDEEKICKKAKPSFDLELYAK---------- 345

  Fly   761 VLPILIHSCPDDFSTVDYFDNLKTEHIGRLVIYAPVVSSSMHLIN-NLELIH----GLAVLPVQQ 820
                ||:.|                ..|..:|.|||:.|:..|:: |...:.    |..||...|
pombe   346 ----LINGC----------------RFGLPIIVAPVIRSTQTLLDKNYRFLDSTNTGFTVLGNYQ 390

  Fly   821 TSGVGRRNNQWLSPPGCAMFSLQLHLTMDSALSSRLPLLQHLVGTAIVNSLRSHEE-YGVLDISI 884
            |:|.||..|.|:||.|...||..:::...:..::.:.|.|:|:..|:|..:|.:.. |..:...|
pombe   391 TAGRGRGQNMWVSPYGTLAFSFIINVDAKNFSTTPIALFQYLMALAVVRGIREYAPGYENIPAFI 455

  Fly   885 KWPNDIYA---------NGNQ--KIGGLVINTTLQGSQAIVNIGSGINLNNSRPTVCINDLIREY 938
            |||||:|.         .|.|  |:.|:::.:..:.:...:.:|.|||::|..|||.:|.|:.|:
pombe   456 KWPNDVYVRVDKGGINFQGKQYMKLSGIIVTSNYRKNVLHLVVGCGINVSNLGPTVSLNTLVDEW 520

  Fly   939 NTRVPNNKLPILKYELLIAMIFNEIERLLGEVQNGDFDSFYALYYSLWLHSGQSVKICLQKDQEK 1003
            |....|.:|....:|.|:|.:.|:.:|....:....|......||..||||.|:|.:.    ...
pombe   521 NKNSDNPRLEKFSFEKLLASVLNQFDRYHRLLLEEGFSLILPEYYQYWLHSNQTVNLA----SGG 581

  Fly  1004 EAEIVGI-DDFGFLEVKL------PTGTIEIVQPDGNSFDMLKGLIIPK 1045
            :|.|.|| .|||||..:|      ||..:..:||||||||:::.||..|
pombe   582 KAIIQGITSDFGFLLAQLLNENNEPTTKVVHLQPDGNSFDLMRNLITRK 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HcsNP_001287175.1 HC2 293..437 CDD:284736
GAT_1 456..>509 CDD:294025 18/63 (29%)
BPL_LplA_LipB 793..921 CDD:301309 41/144 (28%)
BirA2 812..1037 CDD:223417 80/243 (33%)
BPL_C 988..1037 CDD:280411 23/55 (42%)
SPBC30D10.07cNP_596278.1 BPL_N 2..343 CDD:286863 81/375 (22%)
BPL_LplA_LipB 358..503 CDD:281140 41/144 (28%)
BirA2 360..621 CDD:223417 84/264 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 63 1.000 Domainoid score I2917
eggNOG 1 0.900 - - E1_COG0340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 146 1.000 Inparanoid score I1331
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003219
OrthoInspector 1 1.000 - - oto101926
orthoMCL 1 0.900 - - OOG6_100546
Panther 1 1.100 - - LDO PTHR12835
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R144
SonicParanoid 1 1.000 - - X2178
TreeFam 1 0.960 - -
1110.850

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