Protein Alignment Snr1 and smarcb1a

DIOPT Version :10

• Sequence 1: NP_730935.1
• Gene: Snr1 / 40657
• FlyBaseID: FBgn0011715
• Length: 370
• Species: Drosophila melanogaster
• Sequence 2: NP_001007297.1
• Gene: smarcb1a / 799716
• ZFINID: ZDB-GENE-041114-5
• Length: 373
• Species: Danio rerio
• Alignment Length: 377
• Identity: 254/377 - (67%)
• Similarity: 302/377 - (80%)
• Gaps: 11/377 - (2%)

  Fly     1 MAL-QTYGDKPVAFQLEEGGEYYYVGSEVGNYMRHFRGILYKKYPGMTRIVLSNEERKRLAESGL 64
            ||| :|||.||:.|||||.|::|.:|||||||:|.|||.|||:||.::|.:.:.||||::.   .
Zfish     1 MALSKTYGQKPIKFQLEEDGDFYMIGSEVGNYLRMFRGSLYKRYPSLSRRLATVEERKKIV---A 62

  Fly    65 SSH-----ILASSVSLLRAVEVDDIMAGNDEKYRAVSVNTSDTPVPRESKSKKQPQYVPTMPNSS 124
            |||     .||:||:||:|.||::|..|:||||:|||::|......||.|:|:..|:|||:||||
Zfish    63 SSHDHGYTTLATSVTLLKASEVEEIFDGHDEKYKAVSISTEPPAYLREQKAKRNSQWVPTLPNSS 127

  Fly   125 -HLDAVPQATPINRNRVHTKKVRTFPMCFDDTDPTASLENAAQKECLVPIRLDMELEGQKLRDTF 188
             ||||||.:|.|||||:...|.||||:||||.||....|||:|:|.|||||||||::||||||.|
Zfish   128 HHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQQEVLVPIRLDMEIDGQKLRDAF 192

  Fly   189 TWNKNESMITPEQFAEVLCDDLDLNPLPFVPAIAQAIRQQIEAFPNDPPILEETCDQRVIVKLNI 253
            |||.||.::|||.|||:|||||||:||.||||||.|||||||::|.| .||:|..|||||:||||
Zfish   193 TWNMNEKLMTPEMFAEILCDDLDLSPLTFVPAIASAIRQQIESYPTD-SILDEQMDQRVIIKLNI 256

  Fly   254 HVGNTSLVDQVEWDMSEKNNNPEEFAIKLCAELGLGGEFVTAIAYSIRGQLSWHCRTYAFSEAPL 318
            ||||.|||||.|||||||.|:||:||:|||:||||||||||.||||||||||||.|||||||.||
Zfish   257 HVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQLSWHQRTYAFSENPL 321

  Fly   319 STIDVPFRNPSDADAWAPFLETLTDAEMEKKIRDQDRNTRRMRRLANTTTGW 370
            .|:::..||..|||.|.|.|||||||||||||||||||||||||||||...|
Zfish   322 PTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRRLANTAPAW 373

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Snr1	NP_730935.1	WH_NTD_SMARCB1	5..92	CDD:411036	49/91 (54%)
		SNF5	165..348	CDD:428158	137/182 (75%)
smarcb1a	NP_001007297.1	DNA-binding. /evidence=ECO:0000250|UniProtKB:Q12824	1..101		57/102 (56%)
		WH_NTD_SMARCB1	6..95	CDD:411036	49/91 (54%)
		SNF5	169..351	CDD:428158	137/182 (75%)