Protein Alignment Snr1 and Smarcb1

DIOPT Version :10

• Sequence 1: NP_730935.1
• Gene: Snr1 / 40657
• FlyBaseID: FBgn0011715
• Length: 370
• Species: Drosophila melanogaster
• Sequence 2: NP_001421567.1
• Gene: Smarcb1 / 361825
• RGDID: 1308761
• Length: 385
• Species: Rattus norvegicus
• Alignment Length: 386
• Identity: 254/386 - (65%)
• Similarity: 301/386 - (77%)
• Gaps: 20/386 - (5%)

  Fly     1 MAL-QTYGDKPVAFQLEEGGEYYYVGSEVGNYMRHFRGILYKKYPGMTRIVLSNEERKRLAESGL 64
            ||| :|:|.|||.||||:.||:|.:|||||||:|.|||.|||:||.:.|.:.:.||||::.   .
  Rat     4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIV---A 65

  Fly    65 SSH--------------ILASSVSLLRAVEVDDIMAGNDEKYRAVSVNTSDTPVPRESKSKKQPQ 115
            |||              .||:||:||:|.||::|:.||||||:|||::|......||.|:|:..|
  Rat    66 SSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKRNSQ 130

  Fly   116 YVPTMPNSS-HLDAVPQATPINRNRVHTKKVRTFPMCFDDTDPTASLENAAQKECLVPIRLDMEL 179
            :|||:|||| ||||||.:|.|||||:...|.||||:||||.||....|||:|.|.|||||||||:
  Rat   131 WVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLVPIRLDMEI 195

  Fly   180 EGQKLRDTFTWNKNESMITPEQFAEVLCDDLDLNPLPFVPAIAQAIRQQIEAFPNDPPILEETCD 244
            :||||||.||||.||.::|||.|:|:||||||||||.||||||.|||||||::|.| .|||:..|
  Rat   196 DGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQIESYPTD-SILEDQSD 259

  Fly   245 QRVIVKLNIHVGNTSLVDQVEWDMSEKNNNPEEFAIKLCAELGLGGEFVTAIAYSIRGQLSWHCR 309
            ||||:||||||||.|||||.|||||||.|:||:||:|||:||||||||||.||||||||||||.:
  Rat   260 QRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQLSWHQK 324

  Fly   310 TYAFSEAPLSTIDVPFRNPSDADAWAPFLETLTDAEMEKKIRDQDRNTRRMRRLANTTTGW 370
            ||||||.||.|:::..||..|||.|.|.|||||||||||||||||||||||||||||...|
  Rat   325 TYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRRLANTAPAW 385

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Snr1	NP_730935.1	WH_NTD_SMARCB1	5..92	CDD:411036	50/100 (50%)
		SNF5	165..348	CDD:428158	136/182 (75%)
Smarcb1	NP_001421567.1	WH_NTD_SMARCB1	9..107	CDD:411036	50/100 (50%)
		SNF5	181..363	CDD:428158	136/182 (75%)