DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snr1 and Snr1

DIOPT Version :10

Sequence 1:NP_730935.1 Gene:Snr1 / 40657 FlyBaseID:FBgn0011715 Length:370 Species:Drosophila melanogaster
Sequence 2:XP_322006.1 Gene:Snr1 / 1282012 VectorBaseID:AGAMI1_000927 Length:369 Species:Anopheles gambiae


Alignment Length:369 Identity:304/369 - (82%)
Similarity:341/369 - (92%) Gaps:1/369 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALQTYGDKPVAFQLEEGGEYYYVGSEVGNYMRHFRGILYKKYPGMTRIVLSNEERKRLAESGLS 65
            |||:||||||::||:||.||||.||||||||:|.|||.||||||||:|.:|:|||||||.:||:|
Mosquito     1 MALKTYGDKPISFQVEENGEYYCVGSEVGNYLRLFRGSLYKKYPGMSRRLLTNEERKRLLDSGIS 65

  Fly    66 SHILASSVSLLRAVEVDDIMAGNDEKYRAVSVNTSDTPVPRESK-SKKQPQYVPTMPNSSHLDAV 129
            :|:|:||||||:|.||.|::.||||||:||||:||:.|.||||| |||||.:|||||||||||||
Mosquito    66 NHLLSSSVSLLKATEVQDVLDGNDEKYKAVSVHTSEPPAPRESKSSKKQPPWVPTMPNSSHLDAV 130

  Fly   130 PQATPINRNRVHTKKVRTFPMCFDDTDPTASLENAAQKECLVPIRLDMELEGQKLRDTFTWNKNE 194
            |||||||||||:.||||||||||||||||.::|||:|.|.|||||||||:||||||||||||:||
Mosquito   131 PQATPINRNRVYNKKVRTFPMCFDDTDPTLNVENASQSEILVPIRLDMEIEGQKLRDTFTWNRNE 195

  Fly   195 SMITPEQFAEVLCDDLDLNPLPFVPAIAQAIRQQIEAFPNDPPILEETCDQRVIVKLNIHVGNTS 259
            ||||||||||||||||||||.|||||||.||||||||:||:|.:|||..||||:|||||||||||
Mosquito   196 SMITPEQFAEVLCDDLDLNPTPFVPAIAAAIRQQIEAYPNEPVVLEEGSDQRVLVKLNIHVGNTS 260

  Fly   260 LVDQVEWDMSEKNNNPEEFAIKLCAELGLGGEFVTAIAYSIRGQLSWHCRTYAFSEAPLSTIDVP 324
            |||||||||:||.||||||||||||||||||||||||:||||||||||.||||:||.||:|::||
Mosquito   261 LVDQVEWDMAEKENNPEEFAIKLCAELGLGGEFVTAISYSIRGQLSWHQRTYAYSETPLATVEVP 325

  Fly   325 FRNPSDADAWAPFLETLTDAEMEKKIRDQDRNTRRMRRLANTTT 368
            ||.||:||.|||||||||||||||||||||||||||||||||.|
Mosquito   326 FRTPSEADQWAPFLETLTDAEMEKKIRDQDRNTRRMRRLANTFT 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snr1NP_730935.1 WH_NTD_SMARCB1 5..92 CDD:411036 62/86 (72%)
SNF5 165..348 CDD:428158 156/182 (86%)
Snr1XP_322006.1 WH_NTD_SMARCB1 5..92 CDD:411036 62/86 (72%)
SNF5 166..349 CDD:428158 157/182 (86%)

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