DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL44 and MRPL3

DIOPT Version :9

Sequence 1:NP_649541.1 Gene:mRpL44 / 40656 FlyBaseID:FBgn0037330 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_013737.1 Gene:MRPL3 / 855039 SGDID:S000004626 Length:390 Species:Saccharomyces cerevisiae


Alignment Length:381 Identity:68/381 - (17%)
Similarity:143/381 - (37%) Gaps:99/381 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LARVKLLEGSPTVQTRRHIKRWVSPTLRELAHRQKKLGPQKPERRSGFVEWNQRSELFAFGKRLG 75
            |:....|:.|....::|::.      |..|..::|:..|:  ...:.:.|:.|           |
Yeast    34 LSSTCFLQQSSRFTSKRYLH------LSTLTQQEKRFLPE--SELAKYKEYYQ-----------G 79

  Fly    76 ESFELSELQRAFTEKSFAEREEDRRRQLGIEES-----------DLQMP---------------- 113
            ....::|:..:...||.:.|...:|.||..|.:           ..::|                
Yeast    80 LKSTVNEIPESVASKSPSLRTLHKRLQLPNELTYSTLSRCLTCPSAKLPDKINNPTKGAAFVNTV 144

  Fly   114 ------HNSDLVEKGQQIARAYVEAFLQHQLPKVPNEGLQAIASYLLSTETLAHVSTH------- 165
                  .|..|...|:.:...:|...:..:.|::|...|.|..:..:|...|||::.:       
Yeast   145 PTNKYLDNHGLNIMGKNLLSYHVTKSIIQKYPRLPTVVLNAAVNAYISEAVLAHIAKYWGIEVET 209

  Fly   166 --------------------------LGTKDLIQSTEYPPSAESQA-----KSLHAVIGALASSS 199
                                      |.:||.|:.......:|:.|     :|:.|.|.|:....
Yeast   210 TSVLSRYLKMEPFEFTLGRLKFFNNSLNSKDGIELITGKNFSETSALAMSVRSIIAAIWAVTEQK 274

  Fly   200 GIERAFIFVRDFICTQLNQKDLLEVWTPQEPIQLLEKICQERKLGEAEPRLLGDCGKNTVLAAYQ 264
            ..:..:.|:.|.|.::  :.|:.:::..::|.:.|..:|:...|.:...:|:.:.|:.:....:.
Yeast   275 DSQAVYRFIDDHIMSR--KLDITKMFQFEQPTRELAMLCRREGLEKPVSKLVAESGRLSKSPVFI 337

  Fly   265 VGIYANRQLLGKGFGEDVKTATETAALDALQS--IFDTRDNRRPFDFAIQLEPKTV 318
            |.:::..:.||:|:|..:|.|...||.|||..  .::....:.|.     ::|.||
Yeast   338 VHVFSGEETLGEGYGSSLKEAKARAATDALMKWYCYEPLAQQEPV-----IDPGTV 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL44NP_649541.1 Rnc 72..296 CDD:223644 54/294 (18%)
RIBOc 81..219 CDD:197778 34/208 (16%)
MRPL3NP_013737.1 Rnc 114..376 CDD:223644 45/263 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0571
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 50 1.000 Inparanoid score I1841
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005847
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_105063
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2919
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.790

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