DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL44 and MRPL3

DIOPT Version :10

Sequence 1:NP_649541.1 Gene:mRpL44 / 40656 FlyBaseID:FBgn0037330 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_013737.1 Gene:MRPL3 / 855039 SGDID:S000004626 Length:390 Species:Saccharomyces cerevisiae


Alignment Length:382 Identity:69/382 - (18%)
Similarity:143/382 - (37%) Gaps:101/382 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LARVKLLEGSPTVQTRRHIKRWVSPTLRELAHRQKKLGPQKPERRSGFVEWNQRSELFAFGKRL- 74
            |:....|:.|....::|::.      |..|..::|:..|:              |||..:.:.. 
Yeast    34 LSSTCFLQQSSRFTSKRYLH------LSTLTQQEKRFLPE--------------SELAKYKEYYQ 78

  Fly    75 GESFELSELQRAFTEKSFAEREEDRRRQLGIEES-----------DLQMP--------------- 113
            |....::|:..:...||.:.|...:|.||..|.:           ..::|               
Yeast    79 GLKSTVNEIPESVASKSPSLRTLHKRLQLPNELTYSTLSRCLTCPSAKLPDKINNPTKGAAFVNT 143

  Fly   114 -------HNSDLVEKGQQIARAYVEAFLQHQLPKVPNEGLQAIASYLLSTETLAHVSTH------ 165
                   .|..|...|:.:...:|...:..:.|::|...|.|..:..:|...|||::.:      
Yeast   144 VPTNKYLDNHGLNIMGKNLLSYHVTKSIIQKYPRLPTVVLNAAVNAYISEAVLAHIAKYWGIEVE 208

  Fly   166 ---------------------------LGTKDLIQSTEYPPSAESQA-----KSLHAVIGALASS 198
                                       |.:||.|:.......:|:.|     :|:.|.|.|:...
Yeast   209 TTSVLSRYLKMEPFEFTLGRLKFFNNSLNSKDGIELITGKNFSETSALAMSVRSIIAAIWAVTEQ 273

  Fly   199 SGIERAFIFVRDFICTQLNQKDLLEVWTPQEPIQLLEKICQERKLGEAEPRLLGDCGKNTVLAAY 263
            ...:..:.|:.|.|.::  :.|:.:::..::|.:.|..:|:...|.:...:|:.:.|:.:....:
Yeast   274 KDSQAVYRFIDDHIMSR--KLDITKMFQFEQPTRELAMLCRREGLEKPVSKLVAESGRLSKSPVF 336

  Fly   264 QVGIYANRQLLGKGFGEDVKTATETAALDALQS--IFDTRDNRRPFDFAIQLEPKTV 318
            .|.:::..:.||:|:|..:|.|...||.|||..  .::....:.|.     ::|.||
Yeast   337 IVHVFSGEETLGEGYGSSLKEAKARAATDALMKWYCYEPLAQQEPV-----IDPGTV 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL44NP_649541.1 RIBOc 81..219 CDD:197778 34/208 (16%)
DSRM_MRPL44 217..300 CDD:380703 19/84 (23%)
MRPL3NP_013737.1 RIBOc 114..288 CDD:197778 25/173 (14%)
DSRM_MRPL3_like 290..373 CDD:380702 19/84 (23%)

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