Protein Alignment mRpL44 and Dcr-2

DIOPT Version :10

• Sequence 1: NP_649541.1
• Gene: mRpL44 / 40656
• FlyBaseID: FBgn0037330
• Length: 321
• Species: Drosophila melanogaster
• Sequence 2: NP_523778.2
• Gene: Dcr-2 / 36993
• FlyBaseID: FBgn0034246
• Length: 1722
• Species: Drosophila melanogaster
• Alignment Length: 242
• Identity: 53/242 - (21%)
• Similarity: 97/242 - (40%)
• Gaps: 68/242 - (28%)

  Fly    74 LGESFELSELQRAFTEKSFAEREEDRRR---QLGIEESDLQMPHNSDLVEKGQQIARAYVEAFLQ 135
            |.|:.:|||:...|.  :|.|.:..|..   ::.:||:|:| |...||.::.......:....:.
  Fly  1526 LAENAKLSEIISKFV--NFQESQGHRVTNYVRILLEEADVQ-PTPLDLDDELDMTELPHANKCIS 1587

  Fly   136 HQLPK-VPNEGLQAIASYLLSTETLAHVSTHLGTKDLIQSTEYPPSAESQAKSLHAVIGALASSS 199
            .:..| ||.:|     .:.:||                 :.:.|       |:|..|:.||
  Fly  1588 QEAEKGVPPKG-----EFNMST-----------------NVDVP-------KALGDVLEAL---- 1619

  Fly   200 GIERAFIFVRDF-----ICTQLNQKDLLEVWTPQEPIQLLEKICQER--KLGEAEPRLLGDCGKN 257
             |...::..||.     :...|.:.:|.| :|.:.||..:.::.:.:  |...:.|.:.|:
  Fly  1620 -IAAVYLDCRDLQRTWEVIFNLFEPELQE-FTRKVPINHIRQLVEHKHAKPVFSSPIVEGE---- 1678

  Fly   258 TVLAAYQ-------VGIYANRQLLGKGFGEDVKTATETAALDALQSI 297
            ||:.:.|       :.:|        |||.:...|..:||..|||.:
  Fly  1679 TVMVSCQFTCMEKTIKVY--------GFGSNKDQAKLSAAKHALQQL 1717

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mRpL44	NP_649541.1	RIBOc	81..219	CDD:197778	29/146 (20%)
		DSRM_MRPL44	217..300	CDD:380703	21/90 (23%)
Dcr-2	NP_523778.2	DEXHc_dicer	6..204	CDD:350792
		Dicer_PBD	241..343	CDD:277191
		SF2_C_dicer	360..506	CDD:350189
		Dicer_dimer	571..670	CDD:460900
		PAZ	843..1004	CDD:198017
		RIBOc	1194..1391	CDD:238333
		RIBOc	1448..1649	CDD:238333	34/160 (21%)
		dsrm	1653..1717	CDD:425434	18/75 (24%)