Protein Alignment mRpL44 and drosha

DIOPT Version :10

• Sequence 1: NP_649541.1
• Gene: mRpL44 / 40656
• FlyBaseID: FBgn0037330
• Length: 321
• Species: Drosophila melanogaster
• Sequence 2: NP_477436.1
• Gene: drosha / 35747
• FlyBaseID: FBgn0026722
• Length: 1327
• Species: Drosophila melanogaster
• Alignment Length: 280
• Identity: 63/280 - (22%)
• Similarity: 111/280 - (39%)
• Gaps: 45/280 - (16%)

  Fly    44 QKKLGPQKPERRSGFVEWNQRSELFAFGKRLGESFE-LSELQRAFTEKSFAEREEDRRRQLGIEE 107
            |:.||.     ||....:....||..|...:|..|: :..|.||||::|             |..
  Fly   957 QEPLGD-----RSCIDSYRVLKELTKFEDSIGIKFKHIRLLARAFTDRS-------------IGF 1003

  Fly   108 SDLQMPHNSDLVEKGQQIARAYVEAFLQHQLPKVPNEGLQAIASYLLSTETLAHVSTHLG-TKDL 171
            :.|.:..|..|...|..:.:.....:|....|:.....|..:.|.|::..|.|.|...|| .|..
  Fly  1004 THLTLGSNQRLEFLGDTVLQLICSEYLYRHFPEHHEGHLSLLRSSLVNNRTQAVVCDDLGMPKYA 1068

  Fly   172 IQSTEYPPSAESQAKS----LHAVIGALASSSGIERAFIFVRDF--IC--TQLNQKDLLEVWTPQ 228
            :.:.   |.|:.:.|.    |.|.:|||.    :::..::...|  :|  .:|....:.:.|  .
  Fly  1069 VYAN---PKADLKTKDRADLLEAFLGALY----VDKGLLYCEQFCHVCLFPRLQLFIMNQDW--N 1124

  Fly   229 EPIQLLEKICQE-RKLGEAEPRL----LGDCGKNTVLAAYQVGIYANRQLLGKGFGEDVKTATET 288
            :|...|::.|.. |.:...||.:    :.:....|....|:|.:|...:.|....|..::.|...
  Fly  1125 DPKSKLQQCCLTLRTMDGGEPDIPYYKVVEASGPTNTRVYKVAVYFRSKRLATSSGSSIQQAEMN 1189

  Fly   289 AALDALQS---IFDTRDNRR 305
            ||..||::   :|...|:::
  Fly  1190 AAKQALENSRDLFPQLDHQK 1209

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mRpL44	NP_649541.1	RIBOc	81..219	CDD:197778	33/146 (23%)
		DSRM_MRPL44	217..300	CDD:380703	19/90 (21%)
drosha	NP_477436.1	RIBOc	826..942	CDD:197778
		Rnc	973..1196	CDD:440336	55/244 (23%)