DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment mRpL44 and mrpl3

DIOPT Version :9

Sequence 1:	NP_649541.1	Gene:	mRpL44 / 40656	FlyBaseID:	FBgn0037330	Length:	321	Species:	Drosophila melanogaster
Sequence 2:	NP_596672.1	Gene:	mrpl3 / 2541040	PomBaseID:	SPBC3B9.14c	Length:	326	Species:	Schizosaccharomyces pombe

Alignment Length:	261	Identity:	51/261 - (19%)
Similarity:	114/261 - (43%)	Gaps:	47/261 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly    65 SELFAFGKRLG--ESFELSELQRAFTEKSFAEREEDRRRQLGIEESDLQMPH--NSDLVEKGQQI 125
            |:::...||:|  ||:.:..|.:|..:|:.                 :|.|.  |..|...|:..
pombe    45 SKVYTLKKRIGLPESYPMKVLVQALIDKTV-----------------VQNPQYSNEKLWSIGKVF 92

  Fly   126 ARAYVEAFLQHQLPKVPNEGLQAIASYLLSTETLAHVSTHLGTK--------------------- 169
            ...||..:::.:.|::|.|.:..:.:..:.::.|:.::|..|.:
pombe    93 GDFYVLEYIKCKYPRLPEEAVHGMQNGWMGSKALSQLATIWGLEVQRREEGLQESFGKVLAKRAD 157

  Fly   170 -DLIQSTEYPPSAESQAKSLHAVIGALASSSGIERAFIFVRDFICT-QLNQKDLLEVWTPQEPIQ 232
             ::::........|:..:::.|::|.:....|......|:.|.|.: ||:.:.:|::   |.|.:
pombe   158 PEMLRKPGEIYKDEAARRAILAILGGVYLHQGFNDTKKFINDHILSKQLDPRTMLQL---QWPRR 219

  Fly   233 LLEKICQERKLGEAEPRLLGDCGKNTVLAAYQVGIYANRQLLGKGFGEDVKTATETAALDALQSI 297
            .|.::|:...|.|...|::.:.|:.:....:.:|.|:...|||:|....:..|.:.||.::|.|.
pombe   220 QLSRLCKRLSLKEPVYRIIAETGRKSREPVFVIGAYSGHHLLGQGQASSLNLAEQQAAYNSLISY 284

  Fly   298 F 298
            :
pombe   285 Y 285

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
mRpL44	NP_649541.1	Rnc	72..296	CDD:223644	49/250 (20%)
mRpL44	NP_649541.1	RIBOc	81..219	CDD:197778	25/162 (15%)
mrpl3	NP_596672.1	Rnc	40..290	CDD:223644	51/261 (20%)
		RIBOc	65..209	CDD:197778	25/160 (16%)
		DSRM	217..285	CDD:214634	18/67 (27%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0571
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	57	1.000	Inparanoid score	I2017
OMA	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0005847
OrthoInspector	1	1.000	-	-		oto101471
orthoMCL	1	0.900	-	-		OOG6_105063
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2919
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	8	7.790