DRSC/TRiP Functional Genomics Resources

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Protein Alignment POLDIP2 and FBXO3

DIOPT Version :9

Sequence 1:NP_730934.1 Gene:POLDIP2 / 40655 FlyBaseID:FBgn0037329 Length:431 Species:Drosophila melanogaster
Sequence 2:XP_011518282.1 Gene:FBXO3 / 26273 HGNCID:13582 Length:479 Species:Homo sapiens


Alignment Length:226 Identity:63/226 - (27%)
Similarity:98/226 - (43%) Gaps:38/226 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 GNQDSNRSLYAIPGLDYVAHEDIMPYSSSE------KSPLQHELFDKFLTHAPDADPPFVGQDTL 269
            |.|......|.:| |.:..|..:..|.:.|      |:.:.::..|: :...|.|...|:...|.
Human   183 GFQQRQGLKYCLP-LTFCIHTGLSQYIAVEAAEGRNKNEVFYQCPDQ-MARNPAAIDMFIIGATF 245

  Fly   270 KAW---QEKN-----HPWLD---MSDVHK----ETTENVRITVIPFYMGCRETPASSV----YWW 315
            ..|   ..||     .|.:.   ...||.    .||.::.::|...::    ...|||    |::
Human   246 TDWFTSYVKNVVSGGFPIIRDQIFRYVHDPECVATTGDITVSVSTSFL----PELSSVHPPHYFF 306

  Fly   316 RYCIRLE----NLGELSVQLRERHWRIFSLSGTLETVRGRGVVGQEPILSPRLPAFQYSSHVSLQ 376
            .|.||:|    .|.|.:.||..|:|||.:..|.:|.|:|.||||:.||:||. ..::|:|..:..
Human   307 TYRIRIEMSKDALPEKACQLDSRYWRITNAKGDVEEVQGPGVVGEFPIISPG-RVYEYTSCTTFS 370

  Fly   377 APSGHMWG--TFRLEREDGYSFDCKIPPFSL 405
            ..||:|.|  ||.........|:..||.|.:
Human   371 TTSGYMEGYYTFHFLYFKDKIFNVAIPRFHM 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POLDIP2NP_730934.1 YccV-like 72..258 CDD:294919 10/52 (19%)
DUF525 308..390 CDD:282262 36/91 (40%)
FBXO3XP_011518282.1 F-box-like 13..57 CDD:289689
SMI1_KNR4 121..249 CDD:286436 14/67 (21%)
DUF525 294..383 CDD:282262 35/89 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2967
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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