DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL35A and AT1G41880

DIOPT Version :10

Sequence 1:NP_649539.1 Gene:RpL35A / 40654 FlyBaseID:FBgn0037328 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001319158.1 Gene:AT1G41880 / 840799 AraportID:AT1G41880 Length:111 Species:Arabidopsis thaliana


Alignment Length:109 Identity:49/109 - (44%)
Similarity:70/109 - (64%) Gaps:7/109 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 RLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQHPERKTR 113
            ||:.:....||||...||:.|.::::|||...:|..::|.|||..|:|||:|||       ..:.
plant    10 RLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAKTKK-------NGSH 67

  Fly   114 VRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIMLYPSRI 157
            .|.:||||||.|||:|.||::|..|||..:||.|:|:.:|||.|
plant    68 YRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL35ANP_649539.1 Ribosomal_L35Ae 50..150 CDD:460132 43/99 (43%)
AT1G41880NP_001319158.1 PTZ00041 7..111 CDD:240239 48/107 (45%)

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