DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL35A and Rpl35a

DIOPT Version :10

Sequence 1:NP_649539.1 Gene:RpL35A / 40654 FlyBaseID:FBgn0037328 Length:157 Species:Drosophila melanogaster
Sequence 2:XP_063126793.1 Gene:Rpl35a / 57809 RGDID:2323795 Length:154 Species:Rattus norvegicus


Alignment Length:125 Identity:65/125 - (52%)
Similarity:78/125 - (62%) Gaps:25/125 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKK---------- 102
            |||:.||:|.|||||||||.|:.|:|||||...::...||:||||.|||||  ||          
  Rat     3 GRLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKA--KKVPDSLEPDIL 65

  Fly   103 -----CV------PQHPERKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIM 151
                 ||      |.....||||  :||||||.|||:|.|||:|..|||..|:|||||::
  Rat    66 VRCGLCVLSNTVTPGGKPNKTRV--IWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVV 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL35ANP_649539.1 Ribosomal_L35Ae 50..150 CDD:460132 62/120 (52%)
Rpl35aXP_063126793.1 None

Return to query results.
Submit another query.