Protein Alignment khdrbs1b and how

DIOPT Version :9

• Sequence 1: NP_998400.1
• Gene: khdrbs1b / 406516
• ZFINID: ZDB-GENE-040426-2344
• Length: 352
• Species: Danio rerio
• Sequence 2: NP_001262822.1
• Gene: how / 42596
• FlyBaseID: FBgn0264491
• Length: 418
• Species: Drosophila melanogaster
• Alignment Length: 385
• Identity: 113/385 - (29%)
• Similarity: 162/385 - (42%)
• Gaps: 100/385 - (25%)

Zfish     7 YLPQLLAERDSLD--PS-FTHAMKLISAEIEKIEKGDTEKDTESYLDLFTMKNIK---------- 58
            ||.|||.:|..|.  |: |||..:|:..||.::.           ..||.:..:|
  Fly    78 YLAQLLKDRKQLAAFPNVFTHVERLLDEEIARVR-----------ASLFQINGVKKEPLTLPEPE 131

Zfish    59 -----LKERILIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKNKEEELRKN 118
                 :.|::.:||:::|.|||||:||||:|.|.|:|::|||.||.|.||||||||.||:..|
  Fly   132 GSVVTMNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANR-- 194

Zfish   119 GEPKYAHLSMELHVFIEVFAPVPDAYMRMAHAMEEIKKFLFP--DMMDDICQEQFMEMKFLNGGQ 181
            |:|.:.|||.:|||.|.|......|.:::|.|:.|::|.|.|  :..|::.:.|.||:..:||..
  Fly   195 GKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAIINGTY 259

Zfish   182 EH------------GGRGRGGPPIRGRGGLPPPGAPRGR-----GMPPRGGGRGGPPRGGAARGA 229
            ..            |......|.:..........|...|     |:|    |.....|..||  |
  Fly   260 RDTTAKSVAAFSCVGSASYLYPAVCDEEWRRLVAASDSRLLTSTGLP----GLAAQIRAPAA--A 318

Zfish   230 PAGRG---GPSAQLPRGAASNRARPPAPGAPRMPPPPQTQESYDEYSYDESYADTGYESYDSYYS 291
            |.|..   .|...:|..|||..:...||.|           ::|:..:...:|...|.:|.:...
  Fly   319 PLGAPLILNPRMTVPTTAASILSAQAAPTA-----------AFDQTGHGMIFAPYDYANYAALAG 372

Zfish   292 QPQAAETEYYDYGHGETQEGYENYAQDNWNGTPRTAAAAGGKAPTQRQTKPGFREHPYGR 351
            .|..  |||.|:                           .|....||:.... |||||.|
  Fly   373 NPLL--TEYADH---------------------------SGAIKQQRRLATN-REHPYQR 402

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
khdrbs1b	NP_998400.1	Qua1	7..56	CDD:292891	16/51 (31%)
		SF1_like-KH	60..178	CDD:239088	55/119 (46%)
		Sam68-YY	269..319	CDD:293176	9/49 (18%)
how	NP_001262822.1	STAR_dimer	75..123	CDD:293152	17/55 (31%)
		SF1_like-KH	139..260	CDD:239088	57/122 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5176
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810