DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12147 and Vrk1

DIOPT Version :9

Sequence 1:NP_649536.1 Gene:CG12147 / 40651 FlyBaseID:FBgn0037325 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001012194.1 Gene:Vrk1 / 362779 RGDID:1306069 Length:414 Species:Rattus norvegicus


Alignment Length:445 Identity:102/445 - (22%)
Similarity:179/445 - (40%) Gaps:92/445 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 QDRRFSEEKQSLPEIIVAG---------KYRLLKRIGNGSFGELFQAE----------------- 86
            |..|....|:.|.|...||         :::|...||.|.||.::.|:                 
  Rat     8 QAGRQGPAKRRLAEQFAAGEIITDMSKKEWKLGLPIGQGGFGCIYLADTNSSKPVGSDAPCVVKV 72

  Fly    87 ----------GLKYHEKVAIKLESSTVKHPLLPREARIYGILQ-GGLGIPHVKHYATEGAYNVMV 140
                      .||::::.|   :...::..:...:.:..|:.: .|.|:    |.....:|..|:
  Rat    73 EPSDNGPLFTELKFYQRAA---KPEQIQKWIHTHKLKYLGVPKYWGSGL----HDKNGKSYRFMI 130

  Fly   141 MDLLGPTLEDLLNLCSRSFSMKTTLMLADQILARVELLHRRCFIHRDIKPDNFLMGLNRHQTQVY 205
            ||..|..|:.:....::.||.||.|.|:.:||..:|.:|...::|.|||..|.|:.. ::..|||
  Rat   131 MDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLSY-KNPDQVY 194

  Fly   206 MIDFGLAKKFYSLRTQKHIGYTENRDLVGTARYASVRAHY-AEQSRRDDLESVGYLLLYFQRGRL 269
            ::|:|||.::......|.......|...||..:.|:.||. ...|||.|||.:||.::.:..|.|
  Rat   195 LVDYGLAYRYCPDGVHKEYKEDPKRCHDGTLEFTSIDAHNGVAPSRRGDLEILGYCMIQWLSGCL 259

  Fly   270 PWQGIRAQSQAQKYEKIAEYKANI-PLQQLC---SGLPVEFFMYLKYCRKLHFAEKPDY-----V 325
            ||:.........:..|| .|:.|: .|.:.|   ...|.|...|::..:.|.:.|||.|     :
  Rat   260 PWEDNLKDPNYVRQSKI-RYRDNVAALMEKCFPERNKPGEIAKYMETVKLLDYTEKPLYQNLRDI 323

  Fly   326 YLQQLFKVLFRNQYKVCDFLFDWVVLKRESPEQQSQQKGRERDRGGKRNVVVQKERHRNKDRDSD 390
            .||.|..:..::..|:     |:..::..|...:...|.|      |:..|           :.:
  Rat   324 LLQGLKAIGSKDDGKL-----DFSAVENGSVNTKPASKKR------KKGAV-----------EEE 366

  Fly   391 TQRCRIKNGGDLLEIEENESTTGEDPNEDKPQKKHGKACSCSYHLQKKRLQDRDR 445
            :..|.::. ..:..:||:.....||             ..|:....::.:|.|.|
  Rat   367 SSVCAVEE-SPVCAVEESPVCAVED-------------MECADTQAQEAIQTRSR 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12147NP_649536.1 STKc_CK1 67..331 CDD:270918 78/301 (26%)
SPS1 67..>306 CDD:223589 69/271 (25%)
Vrk1NP_001012194.1 STKc_VRK1 26..326 CDD:271024 77/308 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.