DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12147 and prde-1

DIOPT Version :9

Sequence 1:NP_649536.1 Gene:CG12147 / 40651 FlyBaseID:FBgn0037325 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_506866.3 Gene:prde-1 / 184750 WormBaseID:WBGene00008995 Length:526 Species:Caenorhabditis elegans


Alignment Length:535 Identity:100/535 - (18%)
Similarity:183/535 - (34%) Gaps:182/535 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 HEKDQRQDRRFSEEKQSLPE-IIVAGKYRLL-KRIGNGS-------------FGELFQAEGLK-- 89
            |:.:..:.|...|:...|.| .:..||:.:| |:...|:             ||.|:...|..  
 Worm     8 HDLENIEHRFTDEDLAGLKEQKLFNGKWIILEKKEKRGAAYCYLVCDKPCKKFGILYLEIGEDNV 72

  Fly    90 ---------YHEKVAIKLESSTVKHPLLPREARIYGILQGGLGIPHVKHYATEGAYNVMVMDLLG 145
                     ||:      :||      |....|...::..|:...||        :.::|....|
 Worm    73 TTIANQVDFYHQ------QSS------LGYSHRFSALIDAGIINNHV--------FFMVVRIRAG 117

  Fly   146 PTLEDLLN-LCSRSFSMKTTLMLADQILARVELLHRRCFIHRDIKPDNFLMGLNRHQTQVYMIDF 209
            |||.|||. |.|...|:.|...||..:::.:|:|....::.|:.....:::.:...  |.|:.|.
 Worm   118 PTLHDLLKCLSSDKMSVTTASFLAVDMISAIEILSASGWVLRNFDSKQWMLDIKTR--QFYLADA 180

  Fly   210 G----LAKKFYSLRTQKHIGYTENRDL---VGTARYASVRAHYAEQSRR----DDLESVGYLLLY 263
            .    .:.|.:....:.|:...|:.||   .|...||.......:||.|    |.:|.:.|:|..
 Worm   181 TDITVSSDKRHRAIDEIHLRTAESIDLHWKTGDLIYAPRSFVDRDQSHRMTELDMMEMMLYVLYD 245

  Fly   264 FQRGRLPWQGIR-------------------------------------------------AQSQ 279
            :..|:|||:..:                                                 |:.:
 Worm   246 WTHGKLPWKSSKSRERIMEMKELFIENLQKEPEETNKVEQQIDVDVWFDIALRNFAKHLKVAKEE 310

  Fly   280 AQKYEKI--------------------AEYKANIP--LQQLCSGLPV------------------ 304
            .:|.||:                    ..|:..|.  .:.:|||.|.                  
 Worm   311 QEKLEKLPVRGGAWCPKGPRAGAQISTVNYRGIIDDFYKIVCSGRPAWALHWRDVMLDWDRKLEN 375

  Fly   305 ------EFFMYLKYCRKLHFAE--------KPDYVYLQQLFKV-LFRNQYKVCDFLFDWVVLKRE 354
                  .|..|.|:.|.|..:|        :..|..::...:. :.:||..:.::|.        
 Worm   376 TPETSKMFEAYEKHQRSLEISEEWERLQATREHYTVMKNHTETEMAKNQAAIVEYLM-------- 432

  Fly   355 SPEQQSQQKGRERDRGGKRN---VVVQKERHRNKDRDSDTQRCRIKNG-GDLLEIEENESTTGED 415
             ||::::::..::.:..:..   .||.|:|...|.:..|..:..:|:. .||.:....|||:.  
 Worm   433 -PEEEAKEEPIDKKKDPEEEAAAAVVGKKRRGRKPKKKDDPKMELKDEVKDLKDFVVEESTSA-- 494

  Fly   416 PNEDKPQKKHGKACS 430
             :...|:|:  ..||
 Worm   495 -SSSAPKKR--PCCS 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12147NP_649536.1 STKc_CK1 67..331 CDD:270918 73/403 (18%)
SPS1 67..>306 CDD:223589 66/370 (18%)
prde-1NP_506866.3 SPS1 86..350 CDD:223589 52/279 (19%)
PKc_like <94..294 CDD:304357 42/209 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11909
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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