DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orco and Or98a

DIOPT Version :10

Sequence 1:NP_524235.2 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_524536.2 Gene:Or98a / 43341 FlyBaseID:FBgn0039551 Length:397 Species:Drosophila melanogaster


Alignment Length:425 Identity:69/425 - (16%)
Similarity:135/425 - (31%) Gaps:122/425 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LNAEEVNELSGNTITTLFFTHCITKFIYLAVNQ--KNFYRTLNIWNQVNTHPLFAESDARYHSIA 128
            :|....|||.  |:..|||......|..|..|.  ..||:...:.::::......:.....|. .
  Fly    70 INTFTPNELL--TVMQLFFNSVGMPFKVLFFNLYISGFYKAKKLLSEMDKRCTTLKERVEVHQ-G 131

  Fly   129 LAKMRKLFFLVMLTTVASATAWTTITFFGDSVKMVVDHETNSSIPVEIPRLPIKSFYPWNASHGM 193
            :.:..|.:.:....    .||:|..||.            ::::..::|......|..:..|...
  Fly   132 VVRCNKAYLIYQFI----YTAYTISTFL------------SAALSGKLPWRIYNPFVDFRESRSS 180

  Fly   194 FYMISFAFQIYYVLFSMIHSNLCDVMFCSWLIFACEQLQHLKGIMKPLMELSASLDTYRPNSAAL 258
            |:..:.. :...:||::..:.:.|:.   .|::......|||     |:.|..            
  Fly   181 FWKAALN-ETALMLFAVTQTLMSDIY---PLLYGLILRVHLK-----LLRLRV------------ 224

  Fly   259 FRSLSANSKSELIHNEEKDPGTDMDMSGIYSSKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANP 323
             .||..:|......||:                                                
  Fly   225 -ESLCTDSGKSDAENEQ------------------------------------------------ 240

  Fly   324 NGLTKKQEMMVRSAIKYWVERHKHVVRLVAAIGDTYGAALLLHMLTSTIKLTLLAYQATKINGVN 388
                        ..|| .::.|..::...|||.......:.:..|...|.|.|        :.:|
  Fly   241 ------------DLIK-CIKDHNLIIDYAAAIRPAVTRTIFVQFLLIGICLGL--------SMIN 284

  Fly   389 VYAF-------TVVGYLGYALAQVFHFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVC 446
            :..|       ..|.|:...:.|.|.||...:.|.::...::.|.:..:|.:.|...|:.::...
  Fly   285 LLFFADIWTGLATVAYINGLMVQTFPFCFVCDLLKKDCELLVSAIFHSNWINSSRSYKSSLRYFL 349

  Fly   447 QQCQKAMSISGAKFFTVSLD---LFASVLGAVVTY 478
            :..||:::.:....|.:|..   ..|.:..:|||:
  Fly   350 KNAQKSIAFTAGSIFPISTGSNIKVAKLAFSVVTF 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_524235.2 7tm_6 70..472 CDD:251636 65/413 (16%)
Or98aNP_524536.2 7tm_6 74..379 CDD:251636 65/414 (16%)

Return to query results.
Submit another query.