DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orco and Or94a

DIOPT Version :10

Sequence 1:NP_524235.2 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_524455.1 Gene:Or94a / 42711 FlyBaseID:FBgn0039033 Length:387 Species:Drosophila melanogaster


Alignment Length:492 Identity:78/492 - (15%)
Similarity:165/492 - (33%) Gaps:148/492 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IRAMKYSGLFMHN--------FTGGSAFMKKVYSSVHLVFLLMQFTFILVN-----MALNAEEVN 72
            ::.|:..||:..:        |||   |:|:.|.  .|:.|.:.||||.:.     ::.|.|:..
  Fly    15 LQVMQLFGLWPWSLKSEEEWTFTG---FVKRNYR--FLLHLPITFTFIGLMWLEAFISSNLEQAG 74

  Fly    73 ELSGNTITTLFFTHCITKFIYLAVNQKNFYRTLNIWNQVNTHPLFAESDARYHS---IALAKMRK 134
            ::...:||.:..   :.|.:.:.     .||| ..|..:  :.|....|.:.|:   :...:..:
  Fly    75 QVLYMSITEMAL---VVKILSIW-----HYRT-EAWRLM--YELQHAPDYQLHNQEEVDFWRREQ 128

  Fly   135 LFF--------LVMLTTVASATAWTTITFFGDSVKMVVDHETNSSIPVEIPRLPIKSFYPWNASH 191
            .||        |:.|..|.|..  |.:.|                  :|...||...:.|:...:
  Fly   129 RFFKWFFYIYILISLGVVYSGC--TGVLF------------------LEGYELPFAYYVPFEWQN 173

  Fly   192 GMFYMISFAFQIYYVLFSMIHSNLCDVMFCSWLIFACEQLQHLKGIMKPLMELSASLDTYRPNSA 256
            ...|..::.:.:..:..:.|.:...|.:.| :.:|....|..|.|:.  |.|             
  Fly   174 ERRYWFAYGYDMAGMTLTCISNITLDTLGC-YFLFHISLLYRLLGLR--LRE------------- 222

  Fly   257 ALFRSLSANSKSELIHNEEKDPGTDMDMSGIYSSKADWGAQFRAPSTLQSFGGNGGGGNGLVNGA 321
                  :.|.|::.|                      :|.|.||...:                 
  Fly   223 ------TKNMKNDTI----------------------FGQQLRAIFIM----------------- 242

  Fly   322 NPNGLTKKQEMMVRSAIKYWVERHKHVVRLVAAIGDTYGAALLLHMLTSTIKLTLLAYQATKING 386
                                   |:.:..|...........:|..::.|.:.:....|:...: |
  Fly   243 -----------------------HQRIRSLTLTCQRIVSPYILSQIILSALIICFSGYRLQHV-G 283

  Fly   387 V--NVYAF-TVVGYLGYALAQVFHFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQ 448
            :  |...| :::.::...:.|::..|.:||.:...::.:....|..:|.:.....:..:....:.
  Fly   284 IRDNPGQFISMLQFVSVMILQIYLPCYYGNEITVYANQLTNEVYHTNWLECRPPIRKLLNAYMEH 348

  Fly   449 CQKAMSISGAKFFTVSLDLFASVLGAVVTYFMVLVQL 485
            .:|.::|....||.|.|.:|...:....::..:|:.:
  Fly   349 LKKPVTIRAGNFFAVGLPIFVKTINNAYSFLALLLNV 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_524235.2 7tm_6 70..472 CDD:251636 60/415 (14%)
Or94aNP_524455.1 7tm_6 69..376 CDD:251636 62/422 (15%)

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