DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orco and Or85e

DIOPT Version :9

Sequence 1:NP_001097687.1 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001262374.1 Gene:Or85e / 41018 FlyBaseID:FBgn0026399 Length:467 Species:Drosophila melanogaster


Alignment Length:543 Identity:94/543 - (17%)
Similarity:185/543 - (34%) Gaps:164/543 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SMQPSKYTGLVADLMPNIRAMKYSGLFMHNFTGGSAFMKK---------------------VYSS 47
            |:.|::.:.|...||         ||.:.|.|..|..:.|                     :::|
  Fly    19 SLDPARESNLFRLLM---------GLQLANGTKPSPRLPKWWPKRLEMIGKVLPKAYCSMVIFTS 74

  Fly    48 VHLVFLLMQFTFILVNMALNAEEVNELSGNTITTL--FFTHCITKFIYLAVNQKNFYRTLNIWNQ 110
            :||..|..:.|..:    |...|:..::.....|:  |||...|  ||..:..:.....:...|:
  Fly    75 LHLGVLFTKTTLDV----LPTGELQAITDALTMTIIYFFTGYGT--IYWCLRSRRLLAYMEHMNR 133

  Fly   111 VNTHPLFAESDARYHSI---------ALAKMRKLFFLV-MLTTVASATAWTTITFFGDSVKMVVD 165
                      :.|:||:         |..:|.:.|.:| :::.:....:|..             
  Fly   134 ----------EYRHHSLAGVTFVSSHAAFRMSRNFTVVWIMSCLLGVISWGV------------- 175

  Fly   166 HETNSSIPVEIPRLPIKSFYPWNASHGMFYMISFAFQIY---------------YVLFSMIHSNL 215
                |.:.:.|..||::.:||::|.....|...:|.|::               :|..|::....
  Fly   176 ----SPLMLGIRMLPLQCWYPFDALGPGTYTAVYATQLFGQIMVGMTFGFGGSLFVTLSLLLLGQ 236

  Fly   216 CDVMFCS-------WLIFACEQLQHLKGIMKPLMELSASLDTYRPNSAALFRSLSANSKSELIHN 273
            .||::||       ..:...|.:..|..:.:.|                    |..:||.||  |
  Fly   237 FDVLYCSLKNLDAHTKLLGGESVNGLSSLQEEL--------------------LLGDSKREL--N 279

  Fly   274 E----EKDPGTDMDMSGIYSSKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMMV 334
            :    ::.| ||:..........|.|..|.               |.||.               
  Fly   280 QYVLLQEHP-TDLLRLSAGRKCPDQGNAFH---------------NALVE--------------- 313

  Fly   335 RSAIKYWVERHKHVVRLVAAIGDTYGAALLLHMLTSTIKLTLLAYQATKINGVNVYAFTV--VGY 397
                  .:..|:.::.....:.:.:....|:..|..|.:|.||.:  ..::|.......|  :.|
  Fly   314 ------CIRLHRFILHCSQELENLFSPYCLVKSLQITFQLCLLVF--VGVSGTREVLRIVNQLQY 370

  Fly   398 LGYALAQVFHFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAKFFT 462
            ||..:.::..|...|..|...|....:|.:...|:..:...:..:.|.....::|:.::..||:.
  Fly   371 LGLTIFELLMFTYCGELLSRHSIRSGDAFWRGAWWKHAHFIRQDILIFLVNSRRAVHVTAGKFYV 435

  Fly   463 VSLDLFASVLGAVVTYFMVLVQL 485
            :.::...||:....::..:|.:|
  Fly   436 MDVNRLRSVITQAFSFLTLLQKL 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_001097687.1 7tm_6 70..472 CDD:251636 74/441 (17%)
Or85eNP_001262374.1 7tm_6 120..449 CDD:251636 67/416 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.