DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orco and Or85d

DIOPT Version :9

Sequence 1:NP_001097687.1 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_524281.1 Gene:Or85d / 41011 FlyBaseID:FBgn0037594 Length:412 Species:Drosophila melanogaster


Alignment Length:504 Identity:90/504 - (17%)
Similarity:176/504 - (34%) Gaps:167/504 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 MKYSGLFMHNFTGGSAFMKKVYSSVHLVFLLMQFTFILVNMALNAEEVNELSGNTITTLFFTHCI 88
            :||:.:|..:. |..|:..| ||. ....:|:.:|||...:.||...::||.             
  Fly    25 LKYANVFYLSI-GMMAYDHK-YSQ-KWKEVLLHWTFIAQMVNLNTVLISELI------------- 73

  Fly    89 TKFIYLAVNQ-KNFYR-TLN-------------IWN---------QV-----NTHPLFAESDARY 124
              :::||:.: .||.. |:|             |||         ||     ..||........|
  Fly    74 --YVFLAIGKGSNFLEATMNLSFIGFVIVGDFKIWNISRQRKRLTQVVSRLEELHPQGLAQQEPY 136

  Fly   125 ----HSIALAKMRKLFFLVMLTTVASATAWTTITFFGDSVKMVVDHETNSSIPVEIPR-LPIKSF 184
                |....::..|.:|.:.:..:     | |...:.....:|.|......   :..| ||...:
  Fly   137 NIGHHLSGYSRYSKFYFGMHMVLI-----W-TYNLYWAVYYLVCDFWLGMR---QFERMLPYYCW 192

  Fly   185 YPWNASHGMFYMISFAFQIYYVLFSM-IHSNLC-------DVMFCSWLIFACEQLQHLKGIMKPL 241
            .||:.|.|..|        |::..|. |....|       |::.|:.:..          ::...
  Fly   193 VPWDWSTGYSY--------YFMYISQNIGGQACLSGQLAADMLMCALVTL----------VVMHF 239

  Fly   242 MELSASLDTYRPNSAALFRSLSANSKSELIHNEEKDPGTDMDMSGIYSSKADWGAQFRAPSTLQS 306
            :.|||.::::                                ::||.|.:.|  .:|        
  Fly   240 IRLSAHIESH--------------------------------VAGIGSFQHD--LEF-------- 262

  Fly   307 FGGNGGGGNGLVNGANPNGLTKKQEMMVRSAIKYWVERHKHVVRLVAAIGDTYGAALLLHMLTST 371
                                       :::.:.|    |:.::.|...|.:.:|.:||.:.::|:
  Fly   263 ---------------------------LQATVAY----HQSLIHLCQDINEIFGVSLLSNFVSSS 296

  Fly   372 IKLTLLAYQAT---KINGVNVYAFTVVGYLGYALAQVFHFCIFGNRLIEESSSVMEAAYSCHWYD 433
            ..:..:.:|.|   ||:.:    ..:|.:|..|:.|||.......||::.|..:.:|.|:..|:.
  Fly   297 FIICFVGFQMTIGSKIDNL----VMLVLFLFCAMVQVFMIATHAQRLVDASEQIGQAVYNHDWFR 357

  Fly   434 GSEEAKTFVQIVCQQCQKAMSISGAKFFTVSLDLFASVLGAVVTYFMVL 482
            .....:..:.::.::.|:...:....|..:||...:.:|.....:|.:|
  Fly   358 ADLRYRKMLILIIKRAQQPSRLKATMFLNISLVTVSDLLQLSYKFFALL 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_001097687.1 7tm_6 70..472 CDD:251636 73/446 (16%)
Or85dNP_524281.1 7tm_6 84..400 CDD:251636 70/419 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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