DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orco and Or85c

DIOPT Version :9

Sequence 1:NP_001097687.1 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_524280.2 Gene:Or85c / 41008 FlyBaseID:FBgn0037591 Length:389 Species:Drosophila melanogaster


Alignment Length:510 Identity:86/510 - (16%)
Similarity:168/510 - (32%) Gaps:175/510 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IRAMKYSGLFMHNFTGGSAF-----MKKVYSSVHLVFLLMQFTFILVNMALNAEEVNELSGNTIT 80
            ::.|||: :|.:...|...:     .||.....||:|.              |..:|      ::
  Fly     1 MKFMKYA-VFFYTSVGIEPYTIDSRSKKASLWSHLLFW--------------ANVIN------LS 44

  Fly    81 TLFFTHCITKFIYLAVNQKNFYRTLNIWNQVNTHPLFAESDAR---------YHSIALAKMRKLF 136
            .:.|    .:.:||.|                     |.||.:         |....:..|.|:|
  Fly    45 VIVF----GEILYLGV---------------------AYSDGKFIDAVTVLSYIGFVIVGMSKMF 84

  Fly   137 FLVMLTTVASATAWTTITFFGDSVKMVVDHETNSSIPVEIPRLP--IKSFYPWNASHGMFY-MIS 198
            |:           |...|...|.||.:.....|.....|:.||.  ::|....:.::.:.| ::.
  Fly    85 FI-----------WWKKTDLSDLVKELEHIYPNGKAEEEMYRLDRYLRSCSRISITYALLYSVLI 138

  Fly   199 FAFQIYYVLFSMIHSNLCDV----------MFCSW----------LIFACEQLQHLKGIMKPLME 243
            :.|.::.::..:::..|..:          |:..|          |:|.    |:..|......:
  Fly   139 WTFNLFSIMQFLVYEKLLKIRVVGQTLPYLMYFPWNWHENWTYYVLLFC----QNFAGHTSASGQ 199

  Fly   244 LSASLDTYRPNSAALFRSLSANSKSELIHNEEKDPGTDMDMSGIYSSKA--------DWGAQFRA 300
            :|..|            .|.|.:...::|.:             |.::.        ||      
  Fly   200 ISTDL------------LLCAVATQVVMHFD-------------YLARVVEKQVLDRDW------ 233

  Fly   301 PSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMMVRSAIKYWVERHKHVVRLVAAIGDTYGAALLL 365
                               ..|...|.|.            |:.|:.::||:..:.|.:|..|||
  Fly   234 -------------------SENSRFLAKT------------VQYHQRILRLMDVLNDIFGIPLLL 267

  Fly   366 HMLTSTIKLTLLAYQATKINGVNVYAFTVVG---YLGYALAQVFHFCIFGNRLIEESSSVMEAAY 427
            :.:.||..:..:.:|.|    |.|....::.   :|..:|:||:..|.:|..:.:.|||:..:||
  Fly   268 NFMVSTFVICFVGFQMT----VGVPPDIMIKLFLFLFSSLSQVYLICHYGQLIADASSSLSISAY 328

  Fly   428 SCHWYDGSEEAKTFVQIVCQQCQKAMSISGAKFFTVSLDLFASVLGAVVTYFMVL 482
            ..:|.:.....:..:.....:.|:...:....|..::......:|.....:|.:|
  Fly   329 KQNWQNADIRYRRALVFFIARPQRTTYLKATIFMNITRATMTDLLQVSYKFFALL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_001097687.1 7tm_6 70..472 CDD:251636 72/444 (16%)
Or85cNP_524280.2 7tm_6 63..377 CDD:251636 65/394 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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