DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orco and Or83a

DIOPT Version :9

Sequence 1:NP_001097687.1 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_524234.2 Gene:Or83a / 40648 FlyBaseID:FBgn0037322 Length:453 Species:Drosophila melanogaster


Alignment Length:515 Identity:99/515 - (19%)
Similarity:181/515 - (35%) Gaps:145/515 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IRAMKYSGLFMHNFTGGSAFMKKVYSSVHLVFLLMQFTFILVNMALNAEEVNELSGNTITTL--- 82
            |.||...|.:::    ||..:..:.....|.:.|..: |:.|::|          |..|.|:   
  Fly    29 IAAMYPFGYYVN----GSGVLAVLVRFCDLTYELFNY-FVSVHIA----------GLYICTIYIN 78

  Fly    83 -------FFTHC-ITKFIYL-AVNQKNFYRTL----------NIWNQVNTHPLFAESDARYHSIA 128
                   ||.:| |...||| .:..|.::|..          ||.::..|     .|...:..:.
  Fly    79 YGQGDLDFFVNCLIQTIIYLWTIAMKLYFRRFRPGLLNTILSNINDEYET-----RSAVGFSFVT 138

  Fly   129 LA---KMRKLFFLVMLTTVASATA-WTTITFFGDSVKMVVDHETNSSIPVEIPRLPIKSFYPWNA 189
            :|   :|.||:....:......|. |         :.:.:.:...|        ||:..:||::.
  Fly   139 MAGSYRMSKLWIKTYVYCCYIGTIFW---------LALPIAYRDRS--------LPLACWYPFDY 186

  Fly   190 SHGMFYMISFAFQIY--------YVLFSMIHSNLC-------DVMFCSWLIFACEQLQHLKGIMK 239
            :....|.:.|..|..        :...|.:|..||       ||:|||           ||.:  
  Fly   187 TQPGVYEVVFLLQAMGQIQVAASFASSSGLHMVLCVLISGQYDVLFCS-----------LKNV-- 238

  Fly   240 PLMELSASLDTYRPNSAALFRSLSANSKSEL------IHNEEKDPGTDMDMSGIYSSKADWGAQF 298
                |::|......|...|.:..:..|.:::      ...||:.|..::...|   |..|:.:.|
  Fly   239 ----LASSYVLMGANMTELNQLQAEQSAADVEPGQYAYSVEEETPLQELLKVG---SSMDFSSAF 296

  Fly   299 RAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMMVRSAIKYWVERHKHVVRLVAAIGDTYGAAL 363
            |.     ||                          ||.     ::.|:::|..:..|...|....
  Fly   297 RL-----SF--------------------------VRC-----IQHHRYIVAALKKIESFYSPIW 325

  Fly   364 LLHMLTSTIKLTLLAYQATKINGVNVYAFTV-VG-YLGYALAQVFHFCIFGNRLIEESSSVMEAA 426
            .:.:...|..:.|:|:.:||....|.:...| :| ||...|.::|..|.|.:.:.:.|....||.
  Fly   326 FVKIGEVTFLMCLVAFVSTKSTAANSFMRMVSLGQYLLLVLYELFIICYFADIVFQNSQRCGEAL 390

  Fly   427 YSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAKFFTVSLDLFASVLGAVVTYFMVLVQLK 486
            :...|....::.::.........::...::..|...:::|.|.   |.:.|.|..|..|:
  Fly   391 WRSPWQRHLKDVRSDYMFFMLNSRRQFQLTAGKISNLNVDRFR---GTITTAFSFLTLLQ 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_001097687.1 7tm_6 70..472 CDD:251636 83/450 (18%)
Or83aNP_524234.2 7tm_6 <155..440 CDD:251636 65/360 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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