DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orco and Or59a

DIOPT Version :9

Sequence 1:NP_001097687.1 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_523821.1 Gene:Or59a / 37711 FlyBaseID:FBgn0026384 Length:379 Species:Drosophila melanogaster


Alignment Length:490 Identity:82/490 - (16%)
Similarity:159/490 - (32%) Gaps:143/490 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KYTGLVADLMPNIRAMKYSGLFMHNFTGGSAFMKKVYSSVHLVFLLMQFTFILVNMALNAEEVNE 73
            :|.|:.     :.|...:..|::......:..:...| .|||...|.:      |..:..:.:|.
  Fly    20 RYLGVA-----HFRVENWKNLYVFYSIVSNLLVTLCY-PVHLGISLFR------NRTITEDILNL 72

  Fly    74 LSGNTITTLFFTHCITKFIYLAVNQKNFYRTLNIWNQVNTHPLFAESDARYHSIALAKMRKLFFL 138
            .:..|.|.     |..|.:..|.|.|:......:...::...:..|..:.|..:.: ::|.:.: 
  Fly    73 TTFATCTA-----CSVKCLLYAYNIKDVLEMERLLRLLDERVVGPEQRSIYGQVRV-QLRNVLY- 130

  Fly   139 VMLTTVASATAWTTITFFGDSVKMVVDHETNSSIPVEIPRLPIKSFYPWNASHGMFYMISFAFQI 203
            |.:........:..::|       :...|.....|...|       :.|..|...:| |:.|:||
  Fly   131 VFIGIYMPCALFAELSF-------LFKEERGLMYPAWFP-------FDWLHSTRNYY-IANAYQI 180

  Fly   204 YYVLFSMIHSNLCDVMFCSWLIFACEQLQHLKGIMKPLMELSASLDTYRPNSAALFRSLSANSKS 268
            ..:.|.::.:.:.|   |...:..|....|:|.:.....|:  .||..|                
  Fly   181 VGISFQLLQNYVSD---CFPAVVLCLISSHIKMLYNRFEEV--GLDPAR---------------- 224

  Fly   269 ELIHNEEKDPGTDMDMSGIYSSKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMM 333
                :.|||                                                        
  Fly   225 ----DAEKD-------------------------------------------------------- 229

  Fly   334 VRSAIKYWVERHKHVVRLVAAIGDTYGAALLLHMLTSTIKLTLLAYQATKIN---GVNVYAFTV- 394
                ::..:..|||::.|...|    .|.:.|.|        |:.:..|.:|   |:....|.| 
  Fly   230 ----LEACITDHKHILELFRRI----EAFISLPM--------LIQFTVTALNVCIGLAALVFFVS 278

  Fly   395 -----VGYLGYALA---QVFHFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQK 451
                 :.::.|:||   |:|..|.||.........:..||:||:|:..:...|..:.:..:|..|
  Fly   279 EPMARMYFIFYSLAMPLQIFPSCFFGTDNEYWFGRLHYAAFSCNWHTQNRSFKRKMMLFVEQSLK 343

  Fly   452 AMSISGAKFFTVSLDLFASVLGAVVTYFMVLVQLK 486
            ..:........:.||.|.|.|....:.|.::::::
  Fly   344 KSTAVAGGMMRIHLDTFFSTLKGAYSLFTIIIRMR 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_001097687.1 7tm_6 70..472 CDD:251636 70/413 (17%)
Or59aNP_523821.1 7tm_6 64..368 CDD:251636 71/422 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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