DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orco and Or56a

DIOPT Version :10

Sequence 1:NP_524235.2 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster


Alignment Length:94 Identity:19/94 - (20%)
Similarity:39/94 - (41%) Gaps:8/94 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 VYAFTVVGYLGYALAQVFHFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAM 453
            :|.|.:.|.|     .::|:  ....::|....:..|.:||.||:.....:..:..:....|:.|
  Fly   328 IYLFVMAGIL-----WIYHW--HATLIVECHDELSLAYFSCGWYNFEMPLQKMLVFMMMHAQRPM 385

  Fly   454 SISGAKFFTVSLDLFASVLGAVVTYFMVL 482
            .:. |....::|..|..:.....:||.:|
  Fly   386 KMR-ALLVDLNLRTFIDIGRGAYSYFNLL 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_524235.2 7tm_6 70..472 CDD:251636 16/82 (20%)
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 16/86 (19%)

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