DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orco and Or47b

DIOPT Version :9

Sequence 1:NP_001097687.1 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_523690.3 Gene:Or47b / 36212 FlyBaseID:FBgn0026385 Length:412 Species:Drosophila melanogaster


Alignment Length:143 Identity:29/143 - (20%)
Similarity:58/143 - (40%) Gaps:12/143 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 VERHKHVVRLVAAIGDTYGAALLLHMLTSTIKLTLLAYQATKINGVN-VYAFTVVGYLGYALAQV 405
            |..|:|:::||......:..|....::.|...:::..::......|: ..|...|..:..|..|:
  Fly   266 VRFHQHIIKLVGKANRAFNGAFNAQLMASFSLISISTFETMAAAAVDPKMAAKFVLLMLVAFIQL 330

  Fly   406 FHFCIFGNRLIEESSSVMEAAYSCH-WYDGSEEAKTFVQIVCQQCQKAMSISGAKFFTVSLDLFA 469
            ..:|:.|..:..:|..|.:||:..: |:..|...:..:..|..:.||.:......|...:|.   
  Fly   331 SLWCVSGTLVYTQSVEVAQAAFDINDWHTKSPGIQRDISFVILRAQKPLMYVAEPFLPFTLG--- 392

  Fly   470 SVLGAVVTYFMVL 482
                   ||.:||
  Fly   393 -------TYMLVL 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_001097687.1 7tm_6 70..472 CDD:251636 25/131 (19%)
Or47bNP_523690.3 7tm_6 88..402 CDD:251636 29/143 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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