DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orco and Or43b

DIOPT Version :10

Sequence 1:NP_524235.2 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_523656.2 Gene:Or43b / 35743 FlyBaseID:FBgn0026393 Length:403 Species:Drosophila melanogaster


Alignment Length:479 Identity:83/479 - (17%)
Similarity:158/479 - (32%) Gaps:134/479 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IRAMKYSGLFMHNFTGGSAFMKKVYS-SVHLVFLLMQFTFILVNMALN-AEEVNELSGNTITTLF 83
            :..::.|||.:.|..|....:.:|:| :.::|.|.:.|.   :|..:: ||...||...::....
  Fly    27 METLRNSGLNLKNDFGIGRKIWRVFSFTYNMVILPVSFP---INYVIHLAEFPPELLLQSLQLCL 88

  Fly    84 FTHCIT-KFIYLAVNQKNFYRTLNIWNQVNTHPLFAESDARYHSIALAKMRKLFFLVMLTTVASA 147
            .|.|.. ||..|.|    :...|.:   .|.|  |.|.|.  :.:..|:.||:..:|...|....
  Fly    89 NTWCFALKFFTLIV----YTHRLEL---ANKH--FDELDK--YCVKPAEKRKVRDMVATITRLYL 142

  Fly   148 TAWTTITFFGDSVKM--VVDHETNSSIPVEIPRLPIKSFYP---WNASHGMFYMISFA--FQIYY 205
            |.......:..|..:  ::.|           |:|..::||   |.......|:.||.  |.:.|
  Fly   143 TFVVVYVLYATSTLLDGLLHH-----------RVPYNTYYPFINWRVDRTQMYIQSFLEYFTVGY 196

  Fly   206 VLFSMIHSNLCDVMFCSWLIFACEQLQHLKGIMKPLMELSASLDTYRPNSAALFRSLSANSKSEL 270
            .::                                   ::.:.|:|.....|..|:.....|..:
  Fly   197 AIY-----------------------------------VATATDSYPVIYVAALRTHILLLKDRI 226

  Fly   271 IHNEEKDPGTDMDMSGIYSSKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMMVR 335
            |:..:.......|.|.::.|..|                                          
  Fly   227 IYLGDPSNEGSSDPSYMFKSLVD------------------------------------------ 249

  Fly   336 SAIKYWVERHKHVVRLVAAIGDTYGAALLLHMLTS-------TIKLTLLAYQATKINGVNVYAFT 393
                 .::.|:.::....||.......:....:..       .|.:.|.|.|:|:. |:.:|...
  Fly   250 -----CIKAHRTMLNFCDAIQPIISGTIFAQFIICGSILGIIMINMVLFADQSTRF-GIVIYVMA 308

  Fly   394 VVGYLGYALAQVFHFCIFGNRLIEESSSVMEAAY-SCHWYDGSEEAKTFVQIVCQQCQKAMSISG 457
            |       |.|.|..|.:.|.::::...:..|.: |..|.......:|.:|.: |:.|:.|:.:.
  Fly   309 V-------LLQTFPLCFYCNAIVDDCKELAHALFHSAWWVQDKRYQRTVIQFL-QKLQQPMTFTA 365

  Fly   458 AKFFTVSLDLFASVLGAVVTYFMV 481
            ...|.::|....:|.....|.:.:
  Fly   366 MNIFNINLATNINVAKFAFTVYAI 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_524235.2 7tm_6 70..472 CDD:251636 68/417 (16%)
Or43bNP_523656.2 7tm_6 95..384 CDD:251636 65/401 (16%)

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