DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orco and Or43b

DIOPT Version :9

Sequence 1:NP_001097687.1 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_523656.2 Gene:Or43b / 35743 FlyBaseID:FBgn0026393 Length:403 Species:Drosophila melanogaster


Alignment Length:479 Identity:83/479 - (17%)
Similarity:158/479 - (32%) Gaps:134/479 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IRAMKYSGLFMHNFTGGSAFMKKVYS-SVHLVFLLMQFTFILVNMALN-AEEVNELSGNTITTLF 83
            :..::.|||.:.|..|....:.:|:| :.::|.|.:.|.   :|..:: ||...||...::....
  Fly    27 METLRNSGLNLKNDFGIGRKIWRVFSFTYNMVILPVSFP---INYVIHLAEFPPELLLQSLQLCL 88

  Fly    84 FTHCIT-KFIYLAVNQKNFYRTLNIWNQVNTHPLFAESDARYHSIALAKMRKLFFLVMLTTVASA 147
            .|.|.. ||..|.|    :...|.:   .|.|  |.|.|.  :.:..|:.||:..:|...|....
  Fly    89 NTWCFALKFFTLIV----YTHRLEL---ANKH--FDELDK--YCVKPAEKRKVRDMVATITRLYL 142

  Fly   148 TAWTTITFFGDSVKM--VVDHETNSSIPVEIPRLPIKSFYP---WNASHGMFYMISFA--FQIYY 205
            |.......:..|..:  ::.|           |:|..::||   |.......|:.||.  |.:.|
  Fly   143 TFVVVYVLYATSTLLDGLLHH-----------RVPYNTYYPFINWRVDRTQMYIQSFLEYFTVGY 196

  Fly   206 VLFSMIHSNLCDVMFCSWLIFACEQLQHLKGIMKPLMELSASLDTYRPNSAALFRSLSANSKSEL 270
            .::                                   ::.:.|:|.....|..|:.....|..:
  Fly   197 AIY-----------------------------------VATATDSYPVIYVAALRTHILLLKDRI 226

  Fly   271 IHNEEKDPGTDMDMSGIYSSKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMMVR 335
            |:..:.......|.|.::.|..|                                          
  Fly   227 IYLGDPSNEGSSDPSYMFKSLVD------------------------------------------ 249

  Fly   336 SAIKYWVERHKHVVRLVAAIGDTYGAALLLHMLTS-------TIKLTLLAYQATKINGVNVYAFT 393
                 .::.|:.::....||.......:....:..       .|.:.|.|.|:|:. |:.:|...
  Fly   250 -----CIKAHRTMLNFCDAIQPIISGTIFAQFIICGSILGIIMINMVLFADQSTRF-GIVIYVMA 308

  Fly   394 VVGYLGYALAQVFHFCIFGNRLIEESSSVMEAAY-SCHWYDGSEEAKTFVQIVCQQCQKAMSISG 457
            |       |.|.|..|.:.|.::::...:..|.: |..|.......:|.:|.: |:.|:.|:.:.
  Fly   309 V-------LLQTFPLCFYCNAIVDDCKELAHALFHSAWWVQDKRYQRTVIQFL-QKLQQPMTFTA 365

  Fly   458 AKFFTVSLDLFASVLGAVVTYFMV 481
            ...|.::|....:|.....|.:.:
  Fly   366 MNIFNINLATNINVAKFAFTVYAI 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_001097687.1 7tm_6 70..472 CDD:251636 68/417 (16%)
Or43bNP_523656.2 7tm_6 95..384 CDD:251636 65/401 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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