DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orco and Or42a

DIOPT Version :10

Sequence 1:NP_524235.2 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster


Alignment Length:466 Identity:82/466 - (17%)
Similarity:154/466 - (33%) Gaps:159/466 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 FILVNMALN---------------AEEVNELS-GNTITTLFFT----HCITKFIYLAVNQKNFYR 103
            ::|.:.|||               ...::|.| |..:|:|...    .|.||.:.:....|.|..
  Fly    48 YVLWSFALNFCSTFYQPIGFLTGYISHLSEFSPGEFLTSLQVAFNAWSCSTKVLIVWALVKRFDE 112

  Fly   104 TLNIWNQVN---THPLFAESDARYHSIALAKMRKLFFLVMLTTVASATAWTTITFFGDSVKMVVD 165
            ..|:.::::   |.|  .|....:.:::|:  .::||..|                  :|.||  
  Fly   113 ANNLLDEMDRRITDP--GERLQIHRAVSLS--NRIFFFFM------------------AVYMV-- 153

  Fly   166 HETNSSI-PVEIPRLPIKSFYP---WNASHGMFYMISFAFQIYYVLFSMIHSNLCDVMFCSWLIF 226
            :.||:.: .:.|.|.|.:::||   |.:|     .:..|.|.....|:|..              
  Fly   154 YATNTFLSAIFIGRPPYQNYYPFLDWRSS-----TLHLALQAGLEYFAMAG-------------- 199

  Fly   227 ACEQLQHLKGIMKPLMELSASLDTYRPNSAALFR---SLSANSKSELIHNEEKDPGTDMDMSGIY 288
            ||.|              ...:|.|..|...:.|   |:.|.....|               |.|
  Fly   200 ACFQ--------------DVCVDCYPVNFVLVLRAHMSIFAERLRRL---------------GTY 235

  Fly   289 SSKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMMVRSAIKYWVERHKHVVRLVA 353
            ..::.                                 .:|.|.:|:.     ::.||.::|.|.
  Fly   236 PYESQ---------------------------------EQKYERLVQC-----IQDHKVILRFVD 262

  Fly   354 AIGDTYGAALLLHMLTSTIKL--TLLAYQATKINGVNVYAFTVVG-------YLGYALAQVFHFC 409
            .:.......:.:..|...:.|  ||          :|:..|..:|       ::...|.:...||
  Fly   263 CLRPVISGTIFVQFLVVGLVLGFTL----------INIVLFANLGSAIAALSFMAAVLLETTPFC 317

  Fly   410 IFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAKFFTVSLDLFASVLGA 474
            |..|.|.|:...:.:|.:..:|.|..:..:..:....|:.|:.::......|.:|:....||...
  Fly   318 ILCNYLTEDCYKLADALFQSNWIDEEKRYQKTLMYFLQKLQQPITFMAMNVFPISVGTNISVTKF 382

  Fly   475 VVTYFMVLVQL 485
            ..:.|.::.|:
  Fly   383 SFSVFTLVKQM 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_524235.2 7tm_6 70..472 CDD:251636 75/425 (18%)
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 75/424 (18%)

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