DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orco and Or22c

DIOPT Version :9

Sequence 1:NP_001097687.1 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_523454.2 Gene:Or22c / 33381 FlyBaseID:FBgn0026396 Length:402 Species:Drosophila melanogaster


Alignment Length:523 Identity:106/523 - (20%)
Similarity:185/523 - (35%) Gaps:166/523 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTTSMQPS---------KYTGLVADLMP-NIRAMKYSGLFMHNFTGGSAFMKKVYSSVHLVFLLM 55
            ||.|.||:         :.:||:..|.| .||.           .||..:      ..||:|:  
  Fly     1 MTDSGQPAIADHFYRIPRISGLIVGLWPQRIRG-----------GGGRPW------HAHLLFV-- 46

  Fly    56 QFTFILVNMALNAEEVNELS------GNTITTL-FFTHCITKFIYLAVNQKNFYRTLNIWNQVNT 113
             |.|.:|.:.    .|.|:|      .|.:..| .|....||.:.:          |.:|....:
  Fly    47 -FAFAMVVVG----AVGEVSYGCVHLDNLVVALEAFCPGTTKAVCV----------LKLWVFFRS 96

  Fly   114 HPLFAESDARYHSIALAKMRK--LFFLVMLTTVA---------SATAWTTITFFGDSVKMVVDHE 167
            :..:||...|..:|.....|:  ...||.|.|.|         |.||                  
  Fly    97 NRRWAELVQRLRAILWESRRQEAQRMLVGLATTANRLSLLLLSSGTA------------------ 143

  Fly   168 TNSSIPVE---------IPRLPIKSFYPWNASHGMFYMISFAFQIYYVLFSMIHSNLCDVMFCSW 223
            ||::..::         |.:||.::..|:|.....|.:....|.:.|||.:.  |..|.|...|:
  Fly   144 TNAAFTLQPLIMGLYRWIVQLPGQTELPFNIILPSFAVQPGVFPLTYVLLTA--SGACTVFAFSF 206

  Fly   224 L--IFACEQLQHLKGIMKPLMELSASLDTYRPNSAALFRSLSANSKSELIHNEEKDPGTDMDMSG 286
            :  .|.|..| ::.|..:.:.:                                       |:..
  Fly   207 VDGFFICSCL-YICGAFRLVQQ---------------------------------------DIRR 231

  Fly   287 IYSSKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMMVRSAIKYWVERHKHVVRL 351
            |::.                           ::|.:.:..|::....||..:...||||..::..
  Fly   232 IFAD---------------------------LHGDSVDVFTEEMNAEVRHRLAQVVERHNAIIDF 269

  Fly   352 VAAIGDTYGAALLLHMLTSTIKL--TLLAYQATKINGVNVYAFTVVGYLGYALAQVFHFCIFGNR 414
            ...:...:...:|:|.|::...|  |:|...   :|..::...|.:.|:..||.|:|.:|..||.
  Fly   270 CTDLTRQFTVIVLMHFLSAAFVLCSTILDIM---LNTSSLSGLTYICYIIAALTQLFLYCFGGNH 331

  Fly   415 LIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAKFFTVSLDLFASVLGAVVTYF 479
            :.|.|::|.:..|...||......:..:.::.::.|:|.:|: ..|||.||....|:|....:|.
  Fly   332 VSESSAAVADVLYDMEWYKCDARTRKVILMILRRSQRAKTIA-VPFFTPSLPALRSILSTAGSYI 395

  Fly   480 MVL 482
            .:|
  Fly   396 TLL 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_001097687.1 7tm_6 70..472 CDD:251636 84/432 (19%)
Or22cNP_523454.2 7tm_6 69..392 CDD:251636 82/423 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.