DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orco and Or22b

DIOPT Version :10

Sequence 1:NP_524235.2 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_477425.1 Gene:Or22b / 33336 FlyBaseID:FBgn0026397 Length:397 Species:Drosophila melanogaster


Alignment Length:147 Identity:25/147 - (17%)
Similarity:58/147 - (39%) Gaps:9/147 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 VERHKHVVRLVAAIGDTYGAALLLHMLTSTIKLTL----LAYQATKINGVNVYAFTVVGYLGYAL 402
            |..|:.::..|.|:...:...:.:..|...|.|.|    :.:.:|...||     .||.::....
  Fly   248 VRDHRLILDYVDALRSVFSGTIFVQFLLIGIVLGLSMINIMFFSTLSTGV-----AVVLFMSCVS 307

  Fly   403 AQVFHFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAKFFTVSLDL 467
            .|.|.||...|.::::...:.::.:...|.......|:.:.......|:.:.::....|.:|:..
  Fly   308 MQTFPFCYLCNMIMDDCQEMADSLFQSDWTSADRRYKSTLVYFLHNLQQPIILTAGGVFPISMQT 372

  Fly   468 FASVLGAVVTYFMVLVQ 484
            ..:::....|...::.|
  Fly   373 NLNMVKLAFTVVTIVKQ 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_524235.2 7tm_6 70..472 CDD:251636 23/133 (17%)
Or22bNP_477425.1 7tm_6 81..381 CDD:251636 23/137 (17%)

Return to query results.
Submit another query.