DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orco and Or22a

DIOPT Version :9

Sequence 1:NP_001097687.1 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_523453.1 Gene:Or22a / 33335 FlyBaseID:FBgn0026398 Length:397 Species:Drosophila melanogaster


Alignment Length:151 Identity:27/151 - (17%)
Similarity:57/151 - (37%) Gaps:16/151 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 VERHKHVVRLVAAIGDTYGAALLLHMLTSTIKLTL----LAYQATKINGVN--VYAFTVVGYLGY 400
            :..|:.::..|.|:...:...:.:..|.....|.|    |.:.:|...||.  ::.|.|      
  Fly   248 IRDHRLLLDYVDALRPVFSGTIFVQFLLIGTVLGLSMINLMFFSTFWTGVATCLFMFDV------ 306

  Fly   401 ALAQVFHFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAKFFTVSL 465
             ..:.|.||...|.:|::...:....:...|.......|:.:.......|:.::::....|.:|:
  Fly   307 -SMETFPFCYLCNMIIDDCQEMSNCLFQSDWTSADRRYKSTLVYFLHNLQQPITLTAGGVFPISM 370

  Fly   466 DLFASVLGAVVTYFMVLVQLK 486
            .   :.|..|...|.|:..:|
  Fly   371 Q---TNLAMVKLAFSVVTVIK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_001097687.1 7tm_6 70..472 CDD:251636 22/135 (16%)
Or22aNP_523453.1 7tm_6 81..381 CDD:251636 24/142 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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