DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orco and Or9a

DIOPT Version :10

Sequence 1:NP_524235.2 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_511107.1 Gene:Or9a / 31975 FlyBaseID:FBgn0030204 Length:392 Species:Drosophila melanogaster


Alignment Length:467 Identity:82/467 - (17%)
Similarity:162/467 - (34%) Gaps:156/467 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LVFLLMQFTFI-LVNMALNAEE-------VNELSGNTITTLFFTHCITKFIYLAVNQKNFY---- 102
            |.|:.|...|: :|.|.|.|.|       :::..|:|..::.   .:.||:....::|.|.    
  Fly    43 LTFVTMGPLFLFMVPMFLAAHEYITQVSLLSDTLGSTFASML---TLVKFLLFCYHRKEFVGLIY 104

  Fly   103 -------RTLNIW----------NQVNTHPLFAESDARYHSIA-LAKMRKLFFLVMLTTVASATA 149
                   :.:.:|          ||  :..:.:.:..|...:| :....|.|..::|:::.    
  Fly   105 HIRAILAKEIEVWPDAREIIEVENQ--SDQMLSLTYTRCFGLAGIFAALKPFVGIILSSIR---- 163

  Fly   150 WTTITFFGDSVKMVVDHETNSSIPVEIPRLPIKSFYPWNASHGMFYMISFAFQIYYVLFSMIHSN 214
                   ||.:.:               .||....||::....|||:.::.:.: ...:|.:...
  Fly   164 -------GDEIHL---------------ELPHNGVYPYDLQVVMFYVPTYLWNV-MASYSAVTMA 205

  Fly   215 LCDVMFCSWLIFACEQLQHLKGIMKPLMELSASLDTYRPNSAALFRSLSANSKSELIHNEEKDPG 279
            ||   ..|.|.|.                      ||  |..|:|:.    :|..:||       
  Fly   206 LC---VDSLLFFF----------------------TY--NVCAIFKI----AKHRMIH------- 232

  Fly   280 TDMDMSGIYSSKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEM--MVRSAIKYWV 342
                                    |.:.||                   |:|:  :|:..:    
  Fly   233 ------------------------LPAVGG-------------------KEELEGLVQVLL---- 250

  Fly   343 ERHKHVVRLVAAIGDTYGAALLLHMLTSTIKLTLLAYQATKI--NGVNVYAFTVVGYLGYALAQV 405
             .|:..:::...|.|.|...:.|....|.:::..:.:|...:  |..::|   .:.::|..|..:
  Fly   251 -LHQKGLQIADHIADKYRPLIFLQFFLSALQICFIGFQVADLFPNPQSLY---FIAFVGSLLIAL 311

  Fly   406 FHFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAKFFTVSLDLFAS 470
            |.:...|..:...|.......|..:|.|.|...|..:.|...:.|:...:.| .||..|:..|::
  Fly   312 FIYSKCGENIKSASLDFGNGLYETNWTDFSPPTKRALLIAAMRAQRPCQMKG-YFFEASMATFST 375

  Fly   471 VLGAVVTYFMVL 482
            ::.:.|:|.|:|
  Fly   376 IVRSAVSYIMML 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_524235.2 7tm_6 70..472 CDD:251636 70/434 (16%)
Or9aNP_511107.1 7tm_6 68..381 CDD:251636 69/434 (16%)

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