DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orco and Or65c

DIOPT Version :9

Sequence 1:NP_001097687.1 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_729163.2 Gene:Or65c / 318013 FlyBaseID:FBgn0041623 Length:410 Species:Drosophila melanogaster


Alignment Length:469 Identity:82/469 - (17%)
Similarity:169/469 - (36%) Gaps:151/469 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 YSSVHLVFLLMQFTFILVNMALNAEEVNELSGNTITTLFFTHCITKFIYLAVNQKNFY------- 102
            |.|.....:::|.|...:.|...   |.|..|:.:........|..|.|:|.  |.:|       
  Fly    56 YRSSWHTLVIIQATVCFLTMCYG---VTESLGDKVQMGRDIAFIIGFFYIAF--KIYYFQWYGDE 115

  Fly   103 --------RTLNIWNQVNTHPLFAESDARYHSIALAKMRKLFFLVMLTTVASATAWTTITFFGDS 159
                    .|.:.|.|.....:...:..|:: ..||     |||        |::|  :.|....
  Fly   116 LDEVVEALETFHPWAQKGPGAVDYRTAKRWY-FTLA-----FFL--------ASSW--LVFLCIF 164

  Fly   160 VKMVVDHETNSSIPVEIPRLPIKSFYP--WN------ASHGMFYMISFAFQIYYVLFSMIHSNLC 216
            :.:::    .|.:.|....||:.:.:|  |:      .||...|:    ||.:.|::        
  Fly   165 ILLLI----TSPLWVHQQILPLHAAFPFQWHEKSIHPISHAFIYL----FQTWNVMY-------- 213

  Fly   217 DVMFCSWLIFACEQLQHLKGIMKPL-MELSASLDTYRPNSAALFRSLSANSKSELIHNEEKDPGT 280
               |.:||:  |     ::|:...: :|::.:::..               ..||.|..::..|.
  Fly   214 ---FLTWLV--C-----IEGLSVSIYVEITFAIEVL---------------CLELRHLHQRCHGY 253

  Fly   281 DMDMSGIYSSKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMMVRSAIKYWVERH 345
            :                                                   .:|......|:.|
  Fly   254 E---------------------------------------------------QLRLETNRLVQFH 267

  Fly   346 KHVVRLVAAIGDTYGAALLLHMLTS--TIKLTLL-AYQATKINGVNVYAFTVVGYLGYALAQVFH 407
            :.:|.::......:...|::.|..:  .:.|::| |.:|.|...| |..|.|:..|  ||..:..
  Fly   268 QKIVHILDHTNKVFHGTLIMQMGVNFFLVSLSVLEAMEARKDPKV-VAQFAVLMLL--ALGHLSM 329

  Fly   408 FCIFGNRLIEESSSVMEAAYSCHWYD---GSEEAKTFVQIVCQQCQKAMSISGAKFFTVSLDLFA 469
            :..||:.|.::|.::.||||..  ||   ||::....:.::.::.|:.:.:..:.|.:.:...::
  Fly   330 WSYFGDLLSQKSLTISEAAYEA--YDPIKGSKDVYRDLCLIIRRGQEPLIMRASPFPSFNFINYS 392

  Fly   470 SVLG---AVVTYFM 480
            ::|.   .::|:.:
  Fly   393 AILNQCYGILTFLL 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_001097687.1 7tm_6 70..472 CDD:251636 75/431 (17%)
Or65cNP_729163.2 7tm_6 87..399 CDD:251636 73/426 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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