DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orco and Or46a

DIOPT Version :10

Sequence 1:NP_524235.2 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_995793.1 Gene:Or46a / 2768728 FlyBaseID:FBgn0026388 Length:384 Species:Drosophila melanogaster


Alignment Length:453 Identity:80/453 - (17%)
Similarity:147/453 - (32%) Gaps:134/453 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VHLVFLLMQFTFILVNMALNAEEVNELSGNTITTLFF-----THCITKFIYLAVNQKNFYRTLNI 107
            |.|..:|:.|:|.::|   |..:|.|     |..:||     ..|:.|.::|.:..:.....:: 
  Fly    43 VILFIMLLLFSFEMLN---NISQVRE-----ILKVFFMFATEISCMAKLLHLKLKSRKLAGLVD- 98

  Fly   108 WNQVNTHPLF---AESDAR---YHSIALAKMRKLFFLVMLTTVASATAWTTITFFGDSVKMVVDH 166
               ....|.|   :|.:.:   ...:|:.:||..:.::.|...:..........||:        
  Fly    99 ---AMLSPEFGVKSEQEMQMLELDRVAVVRMRNSYGIMSLGAASLILIVPCFDNFGE-------- 152

  Fly   167 ETNSSIPVEIPRLPIKSFYPWNASHGMFYMISFAFQIYYVLFSMIHSNLCDVMFCSWLIFACEQL 231
                 :|:.:  |.:.|...|     :.|...:.|....:|.:.:.:...|.:..|.|.|...||
  Fly   153 -----LPLAM--LEVCSIEGW-----ICYWSQYLFHSICLLPTCVLNITYDSVAYSLLCFLKVQL 205

  Fly   232 QHLKGIMKPLMELSASLDTYRPNSAALFRSLSANSKSELIHNEEKDPGTDMDMSGIYSSKADWGA 296
            |.|      ::.|........|..                 ||                      
  Fly   206 QML------VLRLEKLGPVIEPQD-----------------NE---------------------- 225

  Fly   297 QFRAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMMVRSAIKYW--VERHKHVVRL-VAAIGDT 358
                                            |..|.:|....|:  :.|.|.:|.| :...|. 
  Fly   226 --------------------------------KIAMELRECAAYYNRIVRFKDLVELFIKGPGS- 257

  Fly   359 YGAALLLHMLTSTIKLTLLAYQATKI---NGVNVYAFTVVGYLGYALAQVFHFCIFGNRLIEESS 420
                  :.::.|.:.|....|..:.:   ||..::......|....|.|:|..|...|.:..:||
  Fly   258 ------VQLMCSVLVLVSNLYDMSTMSIANGDAIFMLKTCIYQLVMLWQIFIICYASNEVTVQSS 316

  Fly   421 SVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAK-FFTVSLDLFASVLGAVVTYFMVL 482
            .:..:.||..|...:...:..|.::.|:....|.:|... .|..||:.|.|::....:||.:|
  Fly   317 RLCHSIYSSQWTGWNRANRRIVLLMMQRFNSPMLLSTFNPTFAFSLEAFGSIVNCSYSYFALL 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_524235.2 7tm_6 70..472 CDD:251636 70/419 (17%)
Or46aNP_995793.1 7tm_6 62..373 CDD:251636 70/423 (17%)

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