DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orco and Or46a

DIOPT Version :9

Sequence 1:NP_001097687.1 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_995793.1 Gene:Or46a / 2768728 FlyBaseID:FBgn0026388 Length:384 Species:Drosophila melanogaster


Alignment Length:453 Identity:80/453 - (17%)
Similarity:147/453 - (32%) Gaps:134/453 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VHLVFLLMQFTFILVNMALNAEEVNELSGNTITTLFF-----THCITKFIYLAVNQKNFYRTLNI 107
            |.|..:|:.|:|.::|   |..:|.|     |..:||     ..|:.|.::|.:..:.....:: 
  Fly    43 VILFIMLLLFSFEMLN---NISQVRE-----ILKVFFMFATEISCMAKLLHLKLKSRKLAGLVD- 98

  Fly   108 WNQVNTHPLF---AESDAR---YHSIALAKMRKLFFLVMLTTVASATAWTTITFFGDSVKMVVDH 166
               ....|.|   :|.:.:   ...:|:.:||..:.::.|...:..........||:        
  Fly    99 ---AMLSPEFGVKSEQEMQMLELDRVAVVRMRNSYGIMSLGAASLILIVPCFDNFGE-------- 152

  Fly   167 ETNSSIPVEIPRLPIKSFYPWNASHGMFYMISFAFQIYYVLFSMIHSNLCDVMFCSWLIFACEQL 231
                 :|:.:  |.:.|...|     :.|...:.|....:|.:.:.:...|.:..|.|.|...||
  Fly   153 -----LPLAM--LEVCSIEGW-----ICYWSQYLFHSICLLPTCVLNITYDSVAYSLLCFLKVQL 205

  Fly   232 QHLKGIMKPLMELSASLDTYRPNSAALFRSLSANSKSELIHNEEKDPGTDMDMSGIYSSKADWGA 296
            |.|      ::.|........|..                 ||                      
  Fly   206 QML------VLRLEKLGPVIEPQD-----------------NE---------------------- 225

  Fly   297 QFRAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMMVRSAIKYW--VERHKHVVRL-VAAIGDT 358
                                            |..|.:|....|:  :.|.|.:|.| :...|. 
  Fly   226 --------------------------------KIAMELRECAAYYNRIVRFKDLVELFIKGPGS- 257

  Fly   359 YGAALLLHMLTSTIKLTLLAYQATKI---NGVNVYAFTVVGYLGYALAQVFHFCIFGNRLIEESS 420
                  :.::.|.:.|....|..:.:   ||..::......|....|.|:|..|...|.:..:||
  Fly   258 ------VQLMCSVLVLVSNLYDMSTMSIANGDAIFMLKTCIYQLVMLWQIFIICYASNEVTVQSS 316

  Fly   421 SVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAK-FFTVSLDLFASVLGAVVTYFMVL 482
            .:..:.||..|...:...:..|.::.|:....|.:|... .|..||:.|.|::....:||.:|
  Fly   317 RLCHSIYSSQWTGWNRANRRIVLLMMQRFNSPMLLSTFNPTFAFSLEAFGSIVNCSYSYFALL 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_001097687.1 7tm_6 70..472 CDD:251636 70/419 (17%)
Or46aNP_995793.1 7tm_6 62..373 CDD:251636 70/423 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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