DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orco and Or19b

DIOPT Version :9

Sequence 1:NP_001097687.1 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_728315.1 Gene:Or19b / 260693 FlyBaseID:FBgn0062565 Length:387 Species:Drosophila melanogaster


Alignment Length:470 Identity:75/470 - (15%)
Similarity:156/470 - (33%) Gaps:134/470 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GGSAFMKKVYSSVHLVFLLMQFTFILVNMALNAEEVNELSGNTITTLFFTHCIT--KFIYLAVNQ 98
            |...|..:.|::..:|:.:.....|.|:.:     ||.|..|::.|...:.|:|  ..:|:    
  Fly    28 GKRTFWGRHYTAYSMVWNVTFHICIWVSFS-----VNLLQSNSLETFCESLCVTMPHTLYM---- 83

  Fly    99 KNFYRTLNI----WNQVNTHPLFAESDARY-----HSIALAKMRKLFFLVMLTTVASATAWTTIT 154
               .:.:|:    ...:::|.|....|.|.     ..|.:|.:.:..|:  ..|:....|.|.: 
  Fly    84 ---LKLINVRRMRGEMISSHWLLRLLDKRLGCADERQIIMAGIERAEFI--FRTIFRGLACTVV- 142

  Fly   155 FFGDSVKMVVDHETNSSIPVEIPRLPIKSFYPWNASHGMFYMISFAFQIYYVLFSMIHSNLCDVM 219
                   :.:.:.:.||.|.    |...::.|||....         ...|:..:|:|:.     
  Fly   143 -------LGIIYISASSEPT----LMYPTWIPWNWKDS---------TSAYLATAMLHTT----- 182

  Fly   220 FCSWLIFACEQLQHLKGIMKPLMELSASLDTYRPNSAALFRSLSANSKSELIHNEEKDPGTDMDM 284
                                                     :|.||  :.|:.|....|||.:.:
  Fly   183 -----------------------------------------ALMAN--ATLVLNLSSYPGTYLIL 204

  Fly   285 SGIYS-------SKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMMVRSAIKYWV 342
            ..:::       ||..:||                          |....:.|.::|.     ::
  Fly   205 VSVHTKALALRVSKLGYGA--------------------------PLPAVRMQAILVG-----YI 238

  Fly   343 ERHKHVVRLVAAIGDTYGAALLLHMLTSTIKLTLLAYQATKINGVNVYAFTVVGYLGYAL-AQVF 406
            ..|:.::||..::..:......|...::......:.| ......|.:..|..:.:|...| .:..
  Fly   239 HDHQIILRLFKSLERSLSMTCFLQFFSTACAQCTICY-FLLFGNVGIMRFMNMLFLLVILTTETL 302

  Fly   407 HFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAKFFTVSLDLFASV 471
            ..|.......:|..|::.|.|||:|...|...:..:.::..:||..|.:.......:|:..|..:
  Fly   303 LLCYTAELPCKEGESLLTAVYSCNWLSQSVNFRRLLLLMLARCQIPMILVSGVIVPISMKTFTVM 367

  Fly   472 LGAVVTYFMVLVQLK 486
            :....|...:|.:::
  Fly   368 IKGAYTMLTLLNEIR 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_001097687.1 7tm_6 70..472 CDD:251636 67/420 (16%)
Or19bNP_728315.1 7tm_6 65..372 CDD:251636 63/416 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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