DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orco and Orco

DIOPT Version :10

Sequence 1:NP_524235.2 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_312379.3 Gene:Orco / 1273405 VectorBaseID:AGAMI1_013813 Length:478 Species:Anopheles gambiae


Alignment Length:483 Identity:374/483 - (77%)
Similarity:411/483 - (85%) Gaps:8/483 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MQPSKYTGLVADLMPNIRAMKYSGLFMHNFTGGSAFMKKVYSSVHLVFLLMQFTFILVNMALNAE 69
            :||:||.|||||||||||.|:.||.|:..:..|...::||||...|..:|:||..||.|:|.||:
Mosquito     3 VQPTKYVGLVADLMPNIRLMQASGHFLFRYVTGPILIRKVYSWWTLAMVLIQFFAILGNLATNAD 67

  Fly    70 EVNELSGNTITTLFFTHCITKFIYLAVNQKNFYRTLNIWNQVNTHPLFAESDARYHSIALAKMRK 134
            :||||:.||||||||||.:|||||.|||.:||||||.||||.|||||||||||||||||||||||
Mosquito    68 DVNELTANTITTLFFTHSVTKFIYFAVNSENFYRTLAIWNQTNTHPLFAESDARYHSIALAKMRK 132

  Fly   135 LFFLVMLTTVASATAWTTITFFGDSVKMVVDHETNSSIPVEIPRLPIKSFYPWNASHGMFYMISF 199
            |..|||.|||.|..||.||||||:|||.|:|..||.:..|:||||||||:|||||..|..|:.||
Mosquito   133 LLVLVMATTVLSVVAWVTITFFGESVKTVLDKATNETYTVDIPRLPIKSWYPWNAMSGPAYIFSF 197

  Fly   200 AFQIYYVLFSMIHSNLCDVMFCSWLIFACEQLQHLKGIMKPLMELSASLDTYRPNSAALFRSLSA 264
            .:|||::||||:.|||.||||||||:.||||||||||||:.|||||||||||||||:.|||::||
Mosquito   198 IYQIYFLLFSMVQSNLADVMFCSWLLLACEQLQHLKGIMRSLMELSASLDTYRPNSSQLFRAISA 262

  Fly   265 NSKSELIHNEEKDPGT-DMDMSGIYSSKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANPNGLTK 328
            .||||||.||||||.. |.|:|||||||||||||||||||||:|..||..|       ||||||:
Mosquito   263 GSKSELIINEEKDPDVKDFDLSGIYSSKADWGAQFRAPSTLQTFDENGRNG-------NPNGLTR 320

  Fly   329 KQEMMVRSAIKYWVERHKHVVRLVAAIGDTYGAALLLHMLTSTIKLTLLAYQATKINGVNVYAFT 393
            ||||||||||||||||||||||||:|||||||.|||||||||||||||||||||||:|||||..|
Mosquito   321 KQEMMVRSAIKYWVERHKHVVRLVSAIGDTYGPALLLHMLTSTIKLTLLAYQATKIDGVNVYGLT 385

  Fly   394 VVGYLGYALAQVFHFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGA 458
            |:|||.|||||||.||||||||||||||||||||||||||||||||||||||||||||||:||||
Mosquito   386 VIGYLCYALAQVFLFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMTISGA 450

  Fly   459 KFFTVSLDLFASVLGAVVTYFMVLVQLK 486
            ||||||||||||||||||||||||||||
Mosquito   451 KFFTVSLDLFASVLGAVVTYFMVLVQLK 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrcoNP_524235.2 7tm_6 70..472 CDD:251636 324/402 (81%)
OrcoXP_312379.3 7tm_6 68..464 CDD:251636 318/396 (80%)

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