DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2663 and rlbp1

DIOPT Version :9

Sequence 1:NP_649535.2 Gene:CG2663 / 40649 FlyBaseID:FBgn0037323 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001005455.1 Gene:rlbp1 / 448050 XenbaseID:XB-GENE-976303 Length:317 Species:Xenopus tropicalis


Alignment Length:247 Identity:64/247 - (25%)
Similarity:109/247 - (44%) Gaps:8/247 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LHPTPDQRVSIREELREPEDPADIERDIKLIREWLETQPHLPKDMDDMRLTTFLRGCKFSLEKVK 68
            |:.|.::|.|..:|||     |.::.......|..:......||..|.....|:|..||.:.:..
 Frog    52 LNETEEKRESAVKELR-----ALVQEKANAGEELCKAVADKVKDKGDDFFLRFIRARKFDVSRAY 111

  Fly    69 KKLDMYYTMRNAVPEFFSNRDINREELNIVLDYVHCPTLPGITPNGRRITFIRGIDCDFQPHHIL 133
            :.|..|...|...||.|  .|:..|.:...::..:...|.....|||.|........|::.....
 Frog   112 ELLKGYVNFRQQYPELF--EDLTPEAVRSTIEAGYPGILTSRDKNGRVILLFNIESWDYEEITFD 174

  Fly   134 DAMKVALMIGDVRLAEESVGIAGDIFILDASVASAAHFAKFSPTVVKKFLIAVQEAYPVKVKEVH 198
            :.::...:|.:..|..|...|.|...|.:....:....:...|:.:||.:..:|:::|.:.|.||
 Frog   175 EILRAYCIILESLLENEETQINGFCIIENFKGFTMQQASGIKPSELKKMVDMLQDSFPARFKAVH 239

  Fly   199 VINISPLVDTIFNFVKPFVKEKIRSRITFH-NDVESLYKVVPRDLLPNEYGG 249
            .|:......|.:|.||||:|.|:..|:..| :|:|..||.:..|:||.::||
 Frog   240 FIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLEGFYKEIDADILPADFGG 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2663NP_649535.2 CRAL_TRIO_N 28..74 CDD:215024 9/45 (20%)
SEC14 95..250 CDD:238099 40/156 (26%)
rlbp1NP_001005455.1 CRAL_TRIO_N 60..117 CDD:215024 14/61 (23%)
CRAL_TRIO 143..292 CDD:306996 40/149 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.