DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or83a and Or56a

DIOPT Version :10

Sequence 1:NP_524234.2 Gene:Or83a / 40648 FlyBaseID:FBgn0037322 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster


Alignment Length:420 Identity:80/420 - (19%)
Similarity:144/420 - (34%) Gaps:110/420 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 VNCLIQTIIYLWTIAMKLYFRRFRPGLLNTILSNIND---EYETRSAVGFSFVTMA--GSY---- 143
            :.|.|.| ..:|.....:..|.||.      ..|:||   .|.|  ||.:..|::|  .:|    
  Fly    45 IRCTILT-ASIWLSCALMLARVFRG------YENLNDGATSYAT--AVQYFAVSIAMFNAYVQRD 100

  Fly   144 ----------------------RMSKLWIKTYVYCCYIGTIFWLALPIA---------YRDRSLP 177
                                  |..:|.:.|..|...|..:.|:...||         ||...||
  Fly   101 KVISLLRVAHSDIQNLMHEADNREMELLVATQAYTRTITLLIWIPSVIAGLMAYSDCIYRSLFLP 165

  Fly   178 LACWYPFDYTQPGVYE------VVFLLQAMGQI-------QVAASFASSSGLHMVLCVLISGQYD 229
            .:.     :..|.|..      ::|.|...|::       .:...:|...|:     ..|...:.
  Fly   166 KSV-----FNVPAVRRGEEHPILLFQLFPFGELCDNFVVGYLGPWYALGLGI-----TAIPLWHT 220

  Fly   230 VLFCSLKNVLASSYVLMGANMTELNQLQAEQSAADVEPGQYAYSVEEETPLQELLKVGSSMDFSS 294
            .:.|.:|.|          |: :|..|.......|:            |.|...|.:|.    .:
  Fly   221 FITCLMKYV----------NL-KLQILNKRVEEMDI------------TRLNSKLVIGR----LT 258

  Fly   295 AFRLSFVRCIQHHRYIVAALKKIESFYSPIWFVKIGEV-------TFLMCLVAFVSTKSTAANSF 352
            |..|:|.: :|..:..|....:|..|...:.::....|       :.|:|.:.|..|  ....|.
  Fly   259 ASELTFWQ-MQLFKEFVKEQLRIRKFVQELQYLICVPVMADFIIFSVLICFLFFALT--VGVPSK 320

  Fly   353 MRMVSLGQYLLLVLYELFIICYFADIVFQNSQRCGEALWRSPWQRHLKDVRSDYMFFMLNSRRQF 417
            |....:..||.::...|:|..:.|.::.:.......|.:...|......::...:|.|::::|..
  Fly   321 MDYFFMFIYLFVMAGILWIYHWHATLIVECHDELSLAYFSCGWYNFEMPLQKMLVFMMMHAQRPM 385

  Fly   418 QLTAGKISNLNVDRFRGTITTAFSFLTLLQ 447
            ::.| .:.:||:..|......|:|:..||:
  Fly   386 KMRA-LLVDLNLRTFIDIGRGAYSYFNLLR 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or83aNP_524234.2 7tm_6 <155..440 CDD:251636 56/313 (18%)
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 58/321 (18%)

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