DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or83a and Or42b

DIOPT Version :10

Sequence 1:NP_524234.2 Gene:Or83a / 40648 FlyBaseID:FBgn0037322 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster


Alignment Length:498 Identity:101/498 - (20%)
Similarity:188/498 - (37%) Gaps:174/498 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IKDDSKRRDLFVFVRQTMCIAAMYPFGYYVNGSGVLAVLVRFCDLTYELFNYFVSVHIAGLYICT 74
            :.:..:.||..:::.:     ||...|:.....|||    |:..||:.|..:         ..||
  Fly    11 LTEQKRSRDGCIYLYR-----AMKFIGWLPPKQGVL----RYVYLTWTLMTF---------VWCT 57

  Fly    75 IYINYGQGDLDFFVNCLIQTIIYLWTIAMKLYFRRFRPG-LLNTILSNINDEYETRSAVGFSFVT 138
            .|:..|     |..:.:.|             .:.|.|| .|.::...||       |.| |.|.
  Fly    58 TYLPLG-----FLGSYMTQ-------------IKSFSPGEFLTSLQVCIN-------AYG-SSVK 96

  Fly   139 MAGSYRMSKLW-------------------------------------IKTYVYCCYIGTIFWLA 166
            :|.:|.|  ||                                     |.|:|||.|.|:.: |:
  Fly    97 VAITYSM--LWRLIKAKNILDQLDLRCTAMEEREKIHLVVARSNHAFLIFTFVYCGYAGSTY-LS 158

  Fly   167 LPIAYRDRSLPLACWYPFDYTQPGVYEVVFLLQAMGQIQVAASFASSSGLHMVLCVLISGQYDVL 231
            ..::.|.   |...:.||.....|..::               :.:|:..:||:    ||     
  Fly   159 SVLSGRP---PWQLYNPFIDWHDGTLKL---------------WVASTLEYMVM----SG----- 196

  Fly   232 FCSLKNVLASSY-----VLMGANMTELNQ----LQAEQSAADVEPGQYAYSVEEETPLQELLKVG 287
             ..|::.|:.||     :::.|::..|.:    |:::::.::.|      |.||           
  Fly   197 -AVLQDQLSDSYPLIYTLILRAHLDMLRERIRRLRSDENLSEAE------SYEE----------- 243

  Fly   288 SSMDFSSAFRLSFVRCIQHHRYIV---AALKKIESFYSPIWFVKIGEVT-FLMCLVAFVSTKSTA 348
                        .|:|:..|:.|:   |.:|.:........|:.||.|. |.:..|.|.|...|.
  Fly   244 ------------LVKCVMDHKLILRYCAIIKPVIQGTIFTQFLLIGLVLGFTLINVFFFSDIWTG 296

  Fly   349 ANSFMRMVSLGQYLLLVLYELFIICYFADIVFQNSQRCGEALWRSPWQRHLKDVRSDYMFFMLNS 413
            ..|||       :::.:|.:.|..||..:::.::.:....|:::|.|....:..::..::|:.|.
  Fly   297 IASFM-------FVITILLQTFPFCYTCNLIMEDCESLTHAIFQSNWVDASRRYKTTLLYFLQNV 354

  Fly   414 RRQFQLTAGKI------SNLNVDRFRGTITTAFSFLTLLQKMD 450
            ::.....||.|      ||::|.:|      |||.:|:.::|:
  Fly   355 QQPIVFIAGGIFQISMSSNISVAKF------AFSVITITKQMN 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or83aNP_524234.2 7tm_6 <155..440 CDD:251636 60/303 (20%)
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 77/385 (20%)

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