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Protein Alignment usf1l and Mitf
DIOPT Version :9
Sequence 1: | NP_998359.1 |
Gene: | usf1l / 406475 |
ZFINID: | ZDB-GENE-040426-2269 |
Length: | 283 |
Species: | Danio rerio |
Sequence 2: | NP_001245436.1 |
Gene: | Mitf / 3885647 |
FlyBaseID: | FBgn0263112 |
Length: | 837 |
Species: | Drosophila melanogaster |
Alignment Length: | 186 |
Identity: | 42/186 - (22%) |
Similarity: | 74/186 - (39%) |
Gaps: | 41/186 - (22%) |
- Green bases have known domain annotations that are detailed below.
Zfish 118 LSDTTAGAMVTGLQTADSVLSQPTSA-----------------------GQLYVMMSPQDVLATT 159
:|.|::....|....:.||.|..||. .:|.:...||::
Fly 434 ISSTSSSLQSTSAPISPSVSSVATSVSEPDDIFDDILQNDSFNFDKNFNSELSIKQEPQNL---- 494
Zfish 160 QPSKPGSQRVSRDDKRRAQHNEVERRRRDKINQWIVQLSKTIP---DCTYDAKNN--QSKSGILS 219
:......:::|.:::..||.:|||||..||..|.:|...:| |..|:...: .:|..||.
Fly 495 --TDAEMNALAKDRQKKDNHNMIERRRRFNINDRIKELGTLLPKGSDAFYEVVRDIRPNKGTILK 557
Zfish 220 KACDYIQELRQSNARLEDELNTADRLRMDNQLLRKEMEEWKSKNQMIRNQLRQHGI 275
.:.|||:.|:....||........::.:.|:.|...::| :..|.:.|||
Fly 558 SSVDYIKCLKHEVTRLRQNELRQRQVELQNRKLMSRIKE-------LEMQAKSHGI 606
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
usf1l | NP_998359.1 |
HLH |
175..229 |
CDD:278439 |
20/58 (34%) |
Mitf | NP_001245436.1 |
MITF_TFEB_C_3_N |
<272..>311 |
CDD:292573 |
|
HLH |
505..570 |
CDD:238036 |
22/64 (34%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1318 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R1708 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.840 |
|
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