DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1172 and AT1G16960

DIOPT Version :10

Sequence 1:NP_649534.1 Gene:CG1172 / 40647 FlyBaseID:FBgn0264712 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_173140.1 Gene:AT1G16960 / 838267 AraportID:AT1G16960 Length:114 Species:Arabidopsis thaliana


Alignment Length:115 Identity:53/115 - (46%)
Similarity:69/115 - (60%) Gaps:9/115 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ASAGIAMGAARK-NRPLCHETIRWRSDVPLTEGQLRSKRDEFWDTAPAFDGRKEIWDALRAATTA 89
            :|..||.|...| .||.     .|:...|::..:|...|:|||||||.:.|:|||||||||   |
plant     5 SSRTIAEGKKEKIRRPK-----TWKHPQPISRDELTQMREEFWDTAPHYGGKKEIWDALRA---A 61

  Fly    90 AEGLDFQMAQAILDGANVSVPNGYLTECYDELGTQYKVPIYCLSYPINIV 139
            ||..|..:||.||:.|.|.|.|..||.||||.|::|::|.|.|..|.|::
plant    62 AEEDDLSLAQTILESAGVIVQNTDLTICYDEKGSKYELPKYVLRDPSNLI 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1172NP_649534.1 UBD 39..141 CDD:465122 48/101 (48%)
Ubl_UBTD 163..232 CDD:340492
AT1G16960NP_173140.1 UBD 15..113 CDD:465122 49/105 (47%)
Blue background indicates that the domain is not in the aligned region.

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