DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1172 and Ubtd2

DIOPT Version :10

Sequence 1:NP_649534.1 Gene:CG1172 / 40647 FlyBaseID:FBgn0264712 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001385502.1 Gene:Ubtd2 / 287178 RGDID:1305506 Length:234 Species:Rattus norvegicus


Alignment Length:233 Identity:115/233 - (49%)
Similarity:164/233 - (70%) Gaps:10/233 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGACVCRMNPDNETMSVSSASISRPASAGIAMGAARKNRPLCHETIRWRSDVPLTEGQLRSKRDE 65
            ||.||...:..:.:::.:|      ...|:|:|   :|:||..|..:|:||.|:|:|||||||||
  Rat     1 MGGCVGAQHDSSGSLNENS------DGTGVALG---RNQPLKKEKPKWKSDYPMTDGQLRSKRDE 56

  Fly    66 FWDTAPAFDGRKEIWDALRAATTAAEGLDFQMAQAILDGANVSVPNGYLTECYDELGTQYKVPIY 130
            ||||||||:|||||||||:||..|.|..|.::||||:||||:::|:|.|||||||||.:|::|:|
  Rat    57 FWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVY 121

  Fly   131 CLSYPINIVKEENGRDSPAEYSEPVDGGTDIFLKLRISSTMTDVKLPVYSKDTVGQCKKKLQAAE 195
            ||:.|||:::|::..::......|...|.:..|:||: ||..|:||.|.|.|||...|::|.|.|
  Rat   122 CLAPPINMIEEKSDIETLDIPEPPPSSGHESQLRLRL-STGKDLKLVVRSTDTVFHMKRRLHATE 185

  Fly   196 GVDACCQRWFYSGKLLGDKVPIDECSIHQGYVVQVIVN 233
            ||:...||||:||:.|.||:.::|..|.:.|||||||:
  Rat   186 GVEPGSQRWFFSGRPLTDKMKLEELKIPKDYVVQVIVS 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1172NP_649534.1 UBD 39..141 CDD:465122 66/101 (65%)
Ubl_UBTD 163..232 CDD:340492 35/68 (51%)
Ubtd2NP_001385502.1 UBD 30..132 CDD:465122 66/101 (65%)
Ubl_UBTD2 151..225 CDD:340641 37/74 (50%)

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