| Sequence 1: | NP_998328.2 | Gene: | amfra / 406442 | ZFINID: | ZDB-GENE-040426-2190 | Length: | 620 | Species: | Danio rerio |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001310441.1 | Gene: | AMFR / 267 | HGNCID: | 463 | Length: | 675 | Species: | Homo sapiens |
| Alignment Length: | 689 | Identity: | 454/689 - (65%) |
|---|---|---|---|
| Similarity: | 517/689 - (75%) | Gaps: | 85/689 - (12%) |
- Green bases have known domain annotations that are detailed below.
|
Zfish 1 MPLLFLERFPWPSLQTYTALSALLLAGTVLSAYSTVRDSEFSSALSEGPQNEELKLENL------ 59
Zfish 60 -------GNVATGVLLHLITDSLFVWVMVNTACCILMLIGKVIQCIVFGPLRVSEKQHLKDKFWN 117
Zfish 118 FIFYKFIFIFGVLNVQRVEEVVLWCLWFSMLIFLHLMVQLCKDRFEYLSFSPTTPMSSHVRVLAL 182
Zfish 183 LVSVLSCCGGLAVLCALAGHIHGMHTVAFMAAECLLVTVRTGHVIIRYSIHLWDLNHEGTWENKS 247
Zfish 248 SYIYYTDFIMELAILSLDLMHHIHMLLFGNIWLSMASLVIFMQLRHLFHEVQRRIRRHKNYLRVI 312
Zfish 313 DNMESRFAVATPEELAANNDDCAICWDSMTTARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNI 377
Zfish 378 HEGRREREEGQREPLEDNMAAAGAADARAHINQHNHFFHFDG----------------------- 419
Zfish 420 ---------SRIASWLPSFSVEVMHTTNILGIAQANNSQLNGMAHQIQEMFPQVPYHLILQDLQL 475
Zfish 476 TRSVEVTTDNILEGRIQVPFPTQSTD------RTPIQMNAASEDGAGASSGS------------- 521
Zfish 522 -------EVAAPEAEDFEVRGSRFSKSADERQRMLMQRKEELLLRARRRYLHKKPEDGDAYSVLG 579
Zfish 580 ADNDDSVPSIEDEDSDSVTLRRRRLAAAAERRILRQEPS 618 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| amfra | NP_998328.2 | zf-rbx1 | 79..>375 | CDD:331150 | 251/295 (85%) |
| RING-H2_AMFR | 332..375 | CDD:319369 | 40/42 (95%) | ||
| RING-H2 finger (C3H2C3-type) | 334..371 | CDD:319369 | 34/36 (94%) | ||
| CUE_AMFR | 451..491 | CDD:270604 | 36/39 (92%) | ||
| AMFR | NP_001310441.1 | None | |||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C194343496 | |
| Domainoid | 1 | 1.000 | 516 | 1.000 | Domainoid score | I2541 |
| eggNOG | 1 | 0.900 | - | - | E1_COG5243 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H888 | |
| Inparanoid | 1 | 1.050 | 899 | 1.000 | Inparanoid score | I2838 |
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG55068 | |
| OrthoDB | 1 | 1.010 | - | - | D149264at7742 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0006872 | |
| OrthoInspector | 1 | 1.000 | - | - | oto45703 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_105132 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR15067 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X3836 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| ZFIN | 1 | 1.500 | - | - | ||
| 18 | 18.270 | |||||