| Sequence 1: | NP_998328.2 | Gene: | amfra / 406442 | ZFINID: | ZDB-GENE-040426-2190 | Length: | 620 | Species: | Danio rerio |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_035917.2 | Gene: | Amfr / 23802 | MGIID: | 1345634 | Length: | 639 | Species: | Mus musculus |
| Alignment Length: | 645 | Identity: | 454/645 - (70%) |
|---|---|---|---|
| Similarity: | 514/645 - (79%) | Gaps: | 39/645 - (6%) |
- Green bases have known domain annotations that are detailed below.
|
Zfish 1 MPLLFLERFPWPSLQTYTALSALLLAGTVLSAYSTVRDSEFSSALSE---GPQNEELKLENLGNV 62
Zfish 63 ATGVLLHLITDSLFVWVMVNTACCILMLIGKVIQCIVFGPLRVSEKQHLKDKFWNFIFYKFIFIF 127
Zfish 128 GVLNVQRVEEVVLWCLWFSMLIFLHLMVQLCKDRFEYLSFSPTTPMSSHVRVLALLVSVLSCCGG 192
Zfish 193 LAVLCALAGHIHGMHTVAFMAAECLLVTVRTGHVIIRYSIHLWDLNHEGTWENKSSYIYYTDFIM 257
Zfish 258 ELAILSLDLMHHIHMLLFGNIWLSMASLVIFMQLRHLFHEVQRRIRRHKNYLRVIDNMESRFAVA 322
Zfish 323 TPEELAANNDDCAICWDSMTTARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIHEGRREREEG 387
Zfish 388 QREPLEDNMAAAGAADARAHINQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQANNSQLNG 452
Zfish 453 MAHQIQEMFPQVPYHLILQDLQLTRSVEVTTDNILEGRIQVPFPTQ------------------- 498
Zfish 499 --------STDRTPIQMNAASEDGAGASSGSEVAAPEAEDFEVRGSRFSKSADERQRMLMQRKEE 555
Zfish 556 LLLRARRRYLHKKPEDGDAYSVLGADNDDSVPSIEDEDSDSVTLRRRRLAAAAERRILRQ 615 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| amfra | NP_998328.2 | zf-rbx1 | 79..>375 | CDD:331150 | 252/295 (85%) |
| RING-H2_AMFR | 332..375 | CDD:319369 | 40/42 (95%) | ||
| RING-H2 finger (C3H2C3-type) | 334..371 | CDD:319369 | 34/36 (94%) | ||
| CUE_AMFR | 451..491 | CDD:270604 | 35/39 (90%) | ||
| Amfr | NP_035917.2 | HRD1 | 82..>378 | CDD:227568 | 252/295 (85%) |
| zf-RING_2 | 335..375 | CDD:290367 | 37/39 (95%) | ||
| CUE_AMFR | 454..494 | CDD:270604 | 35/39 (90%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 500..531 | 2/30 (7%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 594..620 | 11/33 (33%) | |||
| VCP/p97-interacting motif (VIM). /evidence=ECO:0000250|UniProtKB:Q9UKV5 | 618..636 | 14/17 (82%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C193145574 | |
| Domainoid | 1 | 1.000 | 523 | 1.000 | Domainoid score | I2394 |
| eggNOG | 1 | 0.900 | - | - | E1_COG5243 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H888 | |
| Inparanoid | 1 | 1.050 | 901 | 1.000 | Inparanoid score | I2755 |
| OMA | 1 | 1.010 | - | - | QHG55068 | |
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 1 | 1.000 | - | - | FOG0006872 | |
| OrthoInspector | 1 | 1.000 | - | - | oto56015 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_105132 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR15067 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R8523 |
| SonicParanoid | 1 | 1.000 | - | - | X3836 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| ZFIN | 1 | 1.500 | - | - | ||
| 17 | 17.290 | |||||