DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14667 and ranshi

DIOPT Version :9

Sequence 1:NP_001014607.1 Gene:CG14667 / 40643 FlyBaseID:FBgn0037317 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster


Alignment Length:352 Identity:101/352 - (28%)
Similarity:155/352 - (44%) Gaps:38/352 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VCRICANKIMGHQRDRNIFIHMRGKYLGQLKLITGVELTRNQGLPEIVCERCFSELDLATKFRER 70
            |||.| .|....:|..|||.......|..:||:||..|.....||..:|..|.:.|..|..||||
  Fly     5 VCRTC-GKRTNAERSLNIFEKRNQTTLEHIKLLTGAVLKNCSTLPNRLCASCQTCLQQAISFRER 68

  Fly    71 CIFSQKYLL------DIIK--KTSDQSTVHVELSSEPLDEQLIDADQLETHYDD--DQYVCYQGT 125
            |:..|:.||      |.::  :.|.:|.:..|.....|.|..|:.::|    ||  :..:...|.
  Fly    69 CLEVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEVERL----DDLNEGPIQSSGF 129

  Fly   126 KEE--------HQDLEEIELDDDPSAAVIAAAEAAAEAAQQEDLQEQEMERAAKRR--------S 174
            |.|        ::|....|.|.|.|.......|:..|...:::| :.:.|...|||        :
  Fly   130 KVEDILNESKINEDEPNNEDDIDYSEMDYLIYESDTEVDAKQEL-KSDSENPKKRRNRRNPRDSN 193

  Fly   175 NFFICDECGTLFHDAFLYTEHLNGHQNRRDMNQFFPCPECPQTFNKKALLKQHRTQVHLINRRFQ 239
            ..|.|:|||....|...:..|...|:..::    |.|..|...|...|.||:| .:.|...:.|:
  Fly   194 RTFFCEECGNHIKDRISFILHCKRHRGVKE----FGCEFCEDRFCTPAELKRH-IRKHTGEKPFK 253

  Fly   240 CTICHEAFASLGAKLRHDKAHKNERPYPCLECGMIFSSVSELQNHFSTHSKQIRKFRCEPCNMDF 304
            |..|..:|:....:|:|::.|.||||:.|.||...|::...|:||...|:.: :.|||:.|:..|
  Fly   254 CRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGE-KAFRCDLCDKLF 317

  Fly   305 ITRRGLVAHTKTAPHKRLAKYMQDEFD 331
            .....|..|.::..|:|..:.....||
  Fly   318 SRYTHLTTHYRSNAHRRNMQKADTIFD 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14667NP_001014607.1 zf-AD 6..80 CDD:214871 29/79 (37%)
C2H2 Zn finger 179..199 CDD:275368 6/19 (32%)
C2H2 Zn finger 211..232 CDD:275368 7/20 (35%)
C2H2 Zn finger 240..260 CDD:275368 5/19 (26%)
zf-C2H2_8 243..313 CDD:292531 23/69 (33%)
C2H2 Zn finger 268..288 CDD:275368 7/19 (37%)
C2H2 Zn finger 297..316 CDD:275368 5/18 (28%)
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 27/72 (38%)
C2H2 Zn finger 198..218 CDD:275368 6/19 (32%)
COG5048 222..>276 CDD:227381 16/58 (28%)
C2H2 Zn finger 226..246 CDD:275368 7/20 (35%)
zf-H2C2_2 238..262 CDD:290200 7/24 (29%)
C2H2 Zn finger 254..274 CDD:275368 5/19 (26%)
zf-H2C2_2 269..291 CDD:290200 10/21 (48%)
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
zf-H2C2_2 295..319 CDD:290200 9/24 (38%)
C2H2 Zn finger 310..328 CDD:275368 5/17 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I19075
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.960

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