DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14667 and LOC103694540

DIOPT Version :9

Sequence 1:NP_001014607.1 Gene:CG14667 / 40643 FlyBaseID:FBgn0037317 Length:337 Species:Drosophila melanogaster
Sequence 2:XP_038956652.1 Gene:LOC103694540 / 103694540 RGDID:9203794 Length:781 Species:Rattus norvegicus


Alignment Length:335 Identity:64/335 - (19%)
Similarity:109/335 - (32%) Gaps:108/335 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 LDIIKKTSD----------QSTVHV----------ELSSEPLDEQLI--DADQLETHYDDDQYVC 121
            :||::..:|          .|:::|          :...|..|.::|  |.|..:|..|      
  Rat   258 VDIVESKTDNGNEAEVIDQSSSIYVPRDNVYMPVSDSQKEEEDTKVIVGDEDAGDTAAD------ 316

  Fly   122 YQGTKEEHQDLEEIELDDDPSAAVIAAAEAAAEAAQQEDLQEQE--------------MERAAKR 172
               |.|..|.:::.|:    .||.:..|.|||.....::::||.              ::|..|:
  Rat   317 ---TSEHEQQMDDSEI----KAAFLPIAWAAAYDNNSDEIEEQNVTASAVLHQNESGGLDRVHKQ 374

  Fly   173 RSN------------------------FFICDECGTLFHDAFLYTEHLNGHQNRRDMNQFFPCPE 213
            ::.                        .:.|..||..|........|:..|.......::. |.:
  Rat   375 KAKKKKRPESKQYQTAIIVAPDGQTLIVYPCMFCGKKFKTKSFLKRHIKNHPEYLAKKKYH-CTD 438

  Fly   214 CPQTFNKKALLKQHRTQVHL---INRRFQCTICHEAFASLGAKLRHDK----------------- 258
            |..:.|||..|..|.....|   ..:..:|..|.:..:..|....|.|                 
  Rat   439 CDYSTNKKISLHNHMESHKLTIKTEKTTECDDCGKHLSHAGTLCTHKKEKEKVSKTYKCKFCDYE 503

  Fly   259 -------------AHKNERPYPCLECGMIFSSVSELQNHFSTHSKQIRKFRCEPCNMDFITRRGL 310
                         .|..:.|:.|:|||..|...|||:.|...|:.: :.::|:.|.........|
  Rat   504 TAEQTSLNHHLLAVHSKKYPHVCVECGKGFRHPSELKKHIRVHTGE-KPYQCQYCEYKSADSSNL 567

  Fly   311 VAHTKTAPHK 320
            ..|.||...|
  Rat   568 KTHIKTKHSK 577

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity