DRSC/TRiP Functional Genomics Resources

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Protein Alignment hd and dnsn-1

DIOPT Version :10

Sequence 1:NP_649531.1 Gene:hd / 40642 FlyBaseID:FBgn0086695 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_493726.2 Gene:dnsn-1 / 173431 WormBaseID:WBGene00016074 Length:596 Species:Caenorhabditis elegans


Alignment Length:553 Identity:117/553 - (21%)
Similarity:205/553 - (37%) Gaps:112/553 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 KNKLAARVSNNNNRR-------PRHQVDETDKSKLLEAKLAQKRKNPFAKSTADAKKLRVDPQLA 84
            :|:|..::...::.|       |....|........::..|....|||..|:...|:.:.....:
 Worm     9 RNRLKTQIKRRSSCRNILNAVPPPPPTDFEGLEGFTDSCPAPTANNPFKVSSPQKKRQKPQVTFS 73

  Fly    85 DLEPVVTASSCF------------VRETP-TRPAPAKF---------VLQKYDPQAFAKLFQHPQ 127
            ..:|...:.|.|            ||.:| .|.:|.||         :||::.|..|:.|.   .
 Worm    74 QDDPFAASISSFRSPDPLKTPTKGVRSSPRKRKSPQKFERFQSFDPALLQEFHPVDFSALL---A 135

  Fly   128 INAEDEDDAELAARQKHTAHLPVDWSLKTRARFFCPTELP-----------AIQLKTSQLASGLT 181
            .::..:..||.|  |:....||.|..:.::.|.......|           .::.:|:....|:.
 Worm   136 TSSSAQKPAEPA--QESAEDLPTDLRIGSKMRIVSKVSFPWMNTRKSTGNVIVKFQTNDRFDGMQ 198

  Fly   182 SFVRCM-----DPQRTESTLDISDATRFNQCNYYWQHPHLPWLTLYPR-TA-KENVG-VVVGERE 238
            .|.:..     ||   ...|.:|..:.....:.::|.|.:|.|.:||| || :|||. |.:....
 Worm   199 YFNKTFLNGYEDP---TVPLPVSPMSILEAASLFYQFPVIPGLKMYPRITAEQENVSRVSLAPLV 260

  Fly   239 RKALAEEWDFSFRGLFQLLRARQCPYFYLCANTFTVLFRAAGVGGRPES---------------- 287
            ...:.|:|...:..|:...:..|...||:......|||....:.|..:.                
 Worm   261 TSTMLEQWQECYAELYSSYKKGQRGSFYVATAVCNVLFTKMPLSGGGDDVAADDTSQSCSQAFRG 325

  Fly   288 ---HALVTPSTRGMRQALRQEGIEFSMP-----LKSDNSGNA--HDNS------FNEESTTTSLG 336
               .|::|.:|..:|:.||.:|::|..|     ||..:|...  ||.|      .:|....:.:|
 Worm   326 QKLVAVITHTTSAIREHLRSQGVDFEAPKPTSSLKRVSSSPQLHHDQSTLDCLLASESKENSQMG 390

  Fly   337 P------EAGEDA-PPPAQEDEDDDED---------WLESLGVDERELRRIQSSHARKQQAAEMR 385
            |      |..|:: ..|.::|:|.||:         ||..:||..|.::...|.....|..    
 Worm   391 PTTFGGIENSENSDESPLKKDQDSDENESPMKLANQWLNEIGVSPRTVKNTVSRELSSQVT---- 451

  Fly   386 EDFSDNSLLLVDGVECQGFFSYLLNAKSAISTVGRLAGVPPTLLSPVAFPKATMQHLVPRSKKVR 450
             |.:....|:|.|.:....|:.|:::.......|....:||||::...|....:..|...|....
 Worm   452 -DRAGFQCLVVHGSKIHALFNALMDSDVVHEKTGPYTKIPPTLIATSPFLYGQLLSLTKSSNIFA 515

  Fly   451 LDGVDYFSIDIK---GLILPTFLPSVAELLSET 480
            ..|......::|   |.:||.....:.:.:..|
 Worm   516 KAGTKCTEYELKLENGPVLPHCAKMMTQFIRST 548

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