DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cerk and LCB4

DIOPT Version :10

Sequence 1:NP_649530.2 Gene:Cerk / 40640 FlyBaseID:FBgn0037315 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_014814.1 Gene:LCB4 / 854342 SGDID:S000005697 Length:624 Species:Saccharomyces cerevisiae


Alignment Length:389 Identity:93/389 - (23%)
Similarity:144/389 - (37%) Gaps:89/389 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 DTKASSLKPPSPPGSERSSGCSG------------------DVAQGKPTSQYLTINYAMRLSKSQ 161
            |||.:::| .||..|:.:|...|                  ||...|.|   |.|::..|.|::.
Yeast   141 DTKTNTVK-VSPDDSQDNSPSLGIKDNQQLIELTFAVPKGHDVIPQKLT---LLIDHVSRKSRAN 201

  Fly   162 TDCNRWELRRLTFFNSDPYIVRQWDQELQIRLHSSSPTRMRVRRLLVFINPYGGRKAGAQTYERH 226
            |              .:..|.....:|:   |..|.....|.|.:||.|||:||:......:...
Yeast   202 T--------------GEENISSGTVEEI---LEKSYENSKRNRSILVIINPHGGKGTAKNLFLTK 249

  Fly   227 VRPIFQLAGVDATCITTQRANQVKDILLSHDLGVYDAVCCVGGDGTVAEVINGLIFRQMRELGLD 291
            .|||...:|.......|:.|....||....|:..||.:.|..|||...||||||..|..|....:
Yeast   250 ARPILVESGCKIEIAYTKYARHAIDIAKDLDISKYDTIACASGDGIPYEVINGLYRRPDRVDAFN 314

  Fly   292 EQRPPYIPRPALPVGVIPAGSTDTIAYSMHGTADVRTAAIHVILGQHRGLDV--C---SVSNGQS 351
            :          |.|..:|.||.:.::.|.|.|.:...||:.::......:|:  |   |..|...
Yeast   315 K----------LAVTQLPCGSGNAMSISCHWTNNPSYAALCLVKSIETRIDLMCCSQPSYMNEWP 369

  Fly   352 LLRFCASVLSYGYLGDVAAQSENYRWMGPRRYEYSGVKAFLNNRGYDAE--------------LR 402
            .|.|.:.  :||.:.:....:|..|||||.|:........:..:.|..|              :.
Yeast   370 RLSFLSQ--TYGVIAESDINTEFIRWMGPVRFNLGVAFNIIQGKKYPCEVFVKYAAKSKKELKVH 432

  Fly   403 MLEEPD----LLLTTPLEDIPQSPDSVCSLGESVPSVCYANCQRCSFASSIQEQRSSLFIQEES 462
            .||..|    .|...|......|||.:               .:.:..:|.:::.|..|:.|::
Yeast   433 FLENKDKNKGCLTFEPNPSPNSSPDLL---------------SKNNINNSTKDELSPNFLNEDN 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CerkNP_649530.2 DAGK_cat 157..658 CDD:445337 77/329 (23%)
LCB4NP_014814.1 PLN02958 <225..591 CDD:215517 71/284 (25%)

Return to query results.
Submit another query.