DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CD180 and Toll-6

DIOPT Version :9

Sequence 1:NP_005573.2 Gene:CD180 / 4064 HGNCID:6726 Length:661 Species:Homo sapiens
Sequence 2:NP_001246765.1 Gene:Toll-6 / 39663 FlyBaseID:FBgn0036494 Length:1514 Species:Drosophila melanogaster


Alignment Length:649 Identity:149/649 - (22%)
Similarity:248/649 - (38%) Gaps:145/649 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    24 WDQMCIEKEANK---TYNCENLGLS-----EIPDTLPNT---TEFLEFSFNFLPTIHNRTFSRLM 77
            |..:..|.||:.   |...|.|.||     .:||.:..|   ...|..|.|.|..::        
  Fly   184 WPALNFEIEADAFSVTRRLERLDLSSNNIWSLPDNIFCTLSELSALNMSENRLQDVN-------- 240

Human    78 NLTFLDLTRCQINWIHEDTFQSHH-------------QLSTLVLTGNPLIFMAETSLNGPKSLKH 129
            .|.|.|.::...|...|.|..:..             .|..|.::.|..:.:........:.|:.
  Fly   241 ELGFRDRSKEPTNGSTESTSTTESAKKSSSSSTSCSLDLEYLDVSHNDFVVLPANGFGTLRRLRV 305

Human   130 LFLIQTGISNLEFIPVHNLENLESLYLGSNHISSIKFPKDFPARNLKVLD---FQNNAIHYISRE 191
            |.:...|||.:....:..|:||:.|.|.||.|  :..|.:..|...|::.   .|||:|..::.:
  Fly   306 LSVNNNGISMIADKALSGLKNLQILNLSSNKI--VALPTELFAEQAKIIQEVYLQNNSISVLNPQ 368

Human   192 DMRSLE--QAINLSLNFNGNNVKGIELGAFDSTIFQSLNFGGTPNLSVIFNGLQNSTTQSLWLGT 254
            ...:|:  ||::||:|            ...||......|.|...| |:.|...|..|: |....
  Fly   369 LFSNLDQLQALDLSMN------------QITSTWIDKNTFVGLIRL-VLLNLSHNKLTK-LEPEI 419

Human   255 FEDIDDEDISSAMLKGLCEMSVESLNLQEHRFSDISSTTFQCFTQLQELDLTATHLKGLPS-GMK 318
            |.|:               .:::.|||:.::..:|::.||.....|..|.|:...||.|.: .:.
  Fly   420 FSDL---------------YTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYLDAYALN 469

Human   319 GLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGN-VKKLHLGVGCLEKLGNLQTLDLSHNDI 382
            ||.:|..|.|..|....:...:..|..:|..|.:.|| :|.:.|   .|..:.:|:|:||..|.|
  Fly   470 GLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVPL---ALRNMRHLRTVDLGENMI 531

Human   383 EASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFL 447
            ...:  ....|.|.:|..|.|..|....:....|::.|.|::|:||..|:.:..| ..|:....:
  Fly   532 TVME--DSAFKGLGNLYGLRLIGNYLENITMHTFRDLPNLQILNLARNRIAVVEP-GAFEMTSSI 593

Human   448 QVLNLTYCFLDTSNQHLLAGLPVLRHLNLKGNH---FQDGTITKT-------------------- 489
            |.:.|....|:..| .|.:.:|.|..||:..|.   |..|.:..|                    
  Fly   594 QAVRLDGNELNDIN-GLFSNMPSLLWLNISDNRLESFDYGHVPSTLQWLDLHKNRLSSLSNRFGL 657

Human   490 -------------NLLQTVG------SLEVLILSSCGLLSIDQQAFHSLGKMSHVDLSHNSLTCD 535
                         |.||.:|      |:|:|.|:...:.::|...|.....::.|||..|.:|  
  Fly   658 DSELKLQTLDVSFNQLQRIGPSSIPNSIELLFLNDNLITTVDPDTFMHKTNLTRVDLYANQIT-- 720

Human   536 SIDSLSHLKGIYLNLAANSINIISPRLLPILSQQS--TINLSHNPLDCTCSNIHFLTWYKENLH 597
                              :::|.|.|:||:...::  ...:..||..|.|:    :.|.::..|
  Fly   721 ------------------TLDIKSLRILPVWEHRALPEFYIGGNPFTCDCN----IDWLQKINH 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CD180NP_005573.2 leucine-rich repeat 38..57 CDD:275380 7/26 (27%)
LRR 1 54..75 5/23 (22%)
leucine-rich repeat 58..78 CDD:275380 4/19 (21%)
LRR 2 78..99 6/20 (30%)
leucine-rich repeat 79..102 CDD:275380 6/35 (17%)
LRR_8 102..161 CDD:290566 15/58 (26%)
LRR 3 102..123 3/20 (15%)
leucine-rich repeat 103..126 CDD:275380 3/22 (14%)
LRR 4 126..147 5/20 (25%)
leucine-rich repeat 127..150 CDD:275380 6/22 (27%)
LRR 5 150..171 8/20 (40%)
leucine-rich repeat 151..174 CDD:275380 8/22 (36%)
LRR 6 174..195 5/23 (22%)
leucine-rich repeat 175..195 CDD:275380 5/22 (23%)
leucine-rich repeat 196..234 CDD:275380 10/39 (26%)
LRR 7 201..221 3/19 (16%)
leucine-rich repeat 235..275 CDD:275380 8/39 (21%)
LRR 8 275..296 6/20 (30%)
leucine-rich repeat 276..299 CDD:275380 6/22 (27%)
LRR 9 299..320 6/21 (29%)
leucine-rich repeat 300..322 CDD:275380 8/22 (36%)
LRR 10 322..343 4/20 (20%)
LRR_8 323..382 CDD:290566 17/59 (29%)
leucine-rich repeat 323..371 CDD:275380 12/48 (25%)
LRR_RI 327..541 CDD:238064 59/256 (23%)
LRR 11 346..366 6/20 (30%)
LRR_8 371..432 CDD:290566 18/60 (30%)
LRR 12 371..391 6/19 (32%)
leucine-rich repeat 372..397 CDD:275380 8/24 (33%)
LRR 13 397..418 5/20 (25%)
leucine-rich repeat 398..421 CDD:275380 5/22 (23%)
LRR_8 420..481 CDD:290566 18/63 (29%)
LRR 14 421..442 6/20 (30%)
leucine-rich repeat 422..446 CDD:275380 7/23 (30%)
LRR 15 446..466 5/19 (26%)
leucine-rich repeat 447..470 CDD:275380 5/22 (23%)
LRR 16 470..493 8/58 (14%)
leucine-rich repeat 471..497 CDD:275380 11/67 (16%)
LRR_8 497..555 CDD:290566 11/57 (19%)
LRR 17 497..518 6/20 (30%)
leucine-rich repeat 498..521 CDD:275380 5/22 (23%)
LRR 18 521..544 5/22 (23%)
leucine-rich repeat 522..543 CDD:275380 5/20 (25%)
LRR 19 546..564 3/17 (18%)
TPKR_C2 577..626 CDD:301599 6/21 (29%)
Toll-6NP_001246765.1 leucine-rich repeat 148..171 CDD:275380
LRR_8 171..236 CDD:290566 15/51 (29%)
leucine-rich repeat 172..201 CDD:275380 5/16 (31%)
leucine-rich repeat 202..278 CDD:275380 17/83 (20%)
leucine-rich repeat 229..249 CDD:275380 7/27 (26%)
LRR_RI 278..468 CDD:238064 53/220 (24%)
leucine-rich repeat 279..302 CDD:275380 3/22 (14%)
LRR_8 301..386 CDD:290566 26/98 (27%)
leucine-rich repeat 303..326 CDD:275380 6/22 (27%)
leucine-rich repeat 327..350 CDD:275380 8/24 (33%)
LRR 350..729 CDD:227223 100/434 (23%)
leucine-rich repeat 352..375 CDD:275380 5/22 (23%)
leucine-rich repeat 376..401 CDD:275380 9/36 (25%)
LRR_RI <401..626 CDD:238064 65/248 (26%)
leucine-rich repeat 402..425 CDD:275380 8/39 (21%)
leucine-rich repeat 426..449 CDD:275380 6/22 (27%)
leucine-rich repeat 450..473 CDD:275380 8/22 (36%)
leucine-rich repeat 474..497 CDD:275380 5/22 (23%)
leucine-rich repeat 498..518 CDD:275380 7/22 (32%)
leucine-rich repeat 521..544 CDD:275380 8/24 (33%)
leucine-rich repeat 545..566 CDD:275380 5/20 (25%)
leucine-rich repeat 569..592 CDD:275380 7/23 (30%)
leucine-rich repeat 593..615 CDD:275380 5/22 (23%)
leucine-rich repeat 616..637 CDD:275380 6/20 (30%)
leucine-rich repeat 638..662 CDD:275380 0/23 (0%)
leucine-rich repeat 663..684 CDD:275380 4/20 (20%)
leucine-rich repeat 685..708 CDD:275380 5/22 (23%)
leucine-rich repeat 709..728 CDD:275380 7/38 (18%)
LRR_8 883..943 CDD:290566
leucine-rich repeat 885..908 CDD:275380
leucine-rich repeat 909..932 CDD:275380
LRR_8 932..990 CDD:290566
leucine-rich repeat 933..956 CDD:275380
TIR 1114..1247 CDD:214587
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.