DRSC/TRiP Functional Genomics Resources

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Protein Alignment CD180 and CG32055

DIOPT Version :9

Sequence 1:NP_005573.2 Gene:CD180 / 4064 HGNCID:6726 Length:661 Species:Homo sapiens
Sequence 2:NP_729599.1 Gene:CG32055 / 39188 FlyBaseID:FBgn0052055 Length:534 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CD180NP_005573.2 leucine-rich repeat 38..57 CDD:275380
LRR 1 54..75
leucine-rich repeat 58..78 CDD:275380
LRR 2 78..99
leucine-rich repeat 79..102 CDD:275380
LRR_8 102..161 CDD:290566
LRR 3 102..123
leucine-rich repeat 103..126 CDD:275380
LRR 4 126..147
leucine-rich repeat 127..150 CDD:275380
LRR 5 150..171
leucine-rich repeat 151..174 CDD:275380
LRR 6 174..195
leucine-rich repeat 175..195 CDD:275380
leucine-rich repeat 196..234 CDD:275380
LRR 7 201..221
leucine-rich repeat 235..275 CDD:275380
LRR 8 275..296
leucine-rich repeat 276..299 CDD:275380
LRR 9 299..320
leucine-rich repeat 300..322 CDD:275380
LRR 10 322..343
LRR_8 323..382 CDD:290566
leucine-rich repeat 323..371 CDD:275380
LRR_RI 327..541 CDD:238064
LRR 11 346..366
LRR_8 371..432 CDD:290566
LRR 12 371..391
leucine-rich repeat 372..397 CDD:275380
LRR 13 397..418
leucine-rich repeat 398..421 CDD:275380
LRR_8 420..481 CDD:290566
LRR 14 421..442
leucine-rich repeat 422..446 CDD:275380
LRR 15 446..466
leucine-rich repeat 447..470 CDD:275380
LRR 16 470..493
leucine-rich repeat 471..497 CDD:275380
LRR_8 497..555 CDD:290566
LRR 17 497..518
leucine-rich repeat 498..521 CDD:275380
LRR 18 521..544
leucine-rich repeat 522..543 CDD:275380
LRR 19 546..564
TPKR_C2 577..626 CDD:301599
CG32055NP_729599.1 leucine-rich repeat 76..99 CDD:275380
leucine-rich repeat 100..123 CDD:275380
LRR_8 128..180 CDD:290566
leucine-rich repeat 128..147 CDD:275380
leucine-rich repeat 148..171 CDD:275380
leucine-rich repeat 172..192 CDD:275380
LRR_RI <187..400 CDD:238064
LRR_8 192..251 CDD:290566
leucine-rich repeat 193..216 CDD:275380
leucine-rich repeat 217..240 CDD:275380
leucine-rich repeat 241..267 CDD:275380
leucine-rich repeat 268..291 CDD:275380
LRR_8 290..350 CDD:290566
leucine-rich repeat 292..315 CDD:275380
leucine-rich repeat 316..339 CDD:275380
LRR_8 340..400 CDD:290566
leucine-rich repeat 340..365 CDD:275380
leucine-rich repeat 366..389 CDD:275380
leucine-rich repeat 390..413 CDD:275380
LRR_8 391..448 CDD:290566
leucine-rich repeat 414..437 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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