DRSC/TRiP Functional Genomics Resources

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Protein Alignment CD180 and Tehao

DIOPT Version :10

Sequence 1:NP_005573.2 Gene:CD180 / 4064 HGNCID:6726 Length:661 Species:Homo sapiens
Sequence 2:NP_477438.1 Gene:Tehao / 34761 FlyBaseID:FBgn0026760 Length:795 Species:Drosophila melanogaster


Alignment Length:139 Identity:28/139 - (20%)
Similarity:46/139 - (33%) Gaps:43/139 - (30%)


- Green bases have known domain annotations that are detailed below.


Human    64 GSPDYLTPTTFLETENKAKFSISPIQWNNAGQYWC----------------------SYRSLTNK 106
            |:|:|::|...|   ||..        :.|..||.                      :|.::   
  Fly   809 GTPEYVSPEIIL---NKGH--------DRAVDYWALGVLIHELLVGKPPFRGKNHMKTYNAI--- 859

Human   107 LRQSDIMELVVTGVILGEVTLSALPSYVVTS----GRNVTLQCASQVVYDRFILMKEDEKFSTAM 167
            ||..||:||........:|.:..|.......    |:|......:...:..|...|..|:   .|
  Fly   860 LRGIDIIELPSRVPKKAQVLIKRLCRQTAAERLGYGKNGIADIKNHPWFGSFEWQKLKER---TM 921

Human   168 PSWKIYPVL 176
            |:..|.|::
  Fly   922 PAPLIRPIV 930

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CD180NP_005573.2 LRR <38..310 CDD:443914 28/139 (20%)
leucine-rich repeat 38..57 CDD:275380
LRR 1 54..75 4/10 (40%)
leucine-rich repeat 58..78 CDD:275380 5/13 (38%)
LRR 2 78..99 5/42 (12%)
leucine-rich repeat 79..102 CDD:275380 6/44 (14%)
LRR 3 102..123 6/20 (30%)
leucine-rich repeat 103..126 CDD:275380 6/22 (27%)
LRR 4 126..147 3/24 (13%)
leucine-rich repeat 127..150 CDD:275380 3/26 (12%)
LRR 5 150..171 5/20 (25%)
leucine-rich repeat 151..174 CDD:275380 6/22 (27%)
LRR 6 174..195 1/3 (33%)
leucine-rich repeat 175..195 CDD:275380 0/2 (0%)
leucine-rich repeat 196..234 CDD:275380
LRR 7 201..221
LRR_11 221..249 CDD:408601
leucine-rich repeat 235..275 CDD:275380
LRR <275..553 CDD:443914
LRR 8 275..296
leucine-rich repeat 276..299 CDD:275380
LRR 9 299..320
leucine-rich repeat 300..322 CDD:275380
LRR 10 322..343
leucine-rich repeat 323..371 CDD:275380
LRR 11 346..366
LRR 12 371..391
leucine-rich repeat 372..397 CDD:275380
LRR 13 397..418
leucine-rich repeat 398..421 CDD:275380
LRR 14 421..442
leucine-rich repeat 422..446 CDD:275380
LRR 15 446..466
leucine-rich repeat 447..470 CDD:275380
LRR 16 470..493
leucine-rich repeat 471..497 CDD:275380
LRR 17 497..518
leucine-rich repeat 498..521 CDD:275380
LRR 18 521..544
leucine-rich repeat 522..543 CDD:275380
LRR 19 546..564
PCC 549..>626 CDD:188093
TehaoNP_477438.1 LRR 184..>541 CDD:443914
leucine-rich repeat 185..207 CDD:275380
leucine-rich repeat 209..232 CDD:275380
leucine-rich repeat 233..261 CDD:275380
leucine-rich repeat 262..284 CDD:275380
leucine-rich repeat 285..309 CDD:275380
leucine-rich repeat 310..333 CDD:275380
leucine-rich repeat 334..357 CDD:275380
leucine-rich repeat 358..381 CDD:275380
leucine-rich repeat 445..482 CDD:275380
leucine-rich repeat 483..505 CDD:275380
TIR 643..779 CDD:214587
Blue background indicates that the domain is not in the aligned region.

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