DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta7 and PRE3

DIOPT Version :10

Sequence 1:NP_649529.1 Gene:Prosbeta7 / 40639 FlyBaseID:FBgn0250746 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_012533.1 Gene:PRE3 / 853456 SGDID:S000003538 Length:215 Species:Saccharomyces cerevisiae


Alignment Length:173 Identity:41/173 - (23%)
Similarity:75/173 - (43%) Gaps:17/173 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 GTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNIDQKMI 121
            |||::.:.:..||:|.||:..:.|:....:..:::.:|:..|....||..||.|:| .:|.|..:
Yeast    19 GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAI-ADIVQYHL 82

  Fly   122 E---DQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANVDLRGRSYE 183
            |   .|....:.|    :.||....:.|..:..   |...::|.|.|::....:..:.|.|..::
Yeast    83 ELYTSQYGTPSTE----TAASVFKELCYENKDN---LTAGIIVAGYDDKNKGEVYTIPLGGSVHK 140

  Fly   184 -DYVVA---TGFARHLAVPLVREKKPKDR--DFTAVEASELIR 220
             .|.:|   :.|.........||...|:.  ||.....|:.|:
Yeast   141 LPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIK 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta7NP_649529.1 proteasome_beta_type_4 60..252 CDD:239729 38/170 (22%)
PRE3NP_012533.1 proteasome_beta_type_6 20..204 CDD:239731 40/172 (23%)

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