DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta7 and PRE4

DIOPT Version :10

Sequence 1:NP_649529.1 Gene:Prosbeta7 / 40639 FlyBaseID:FBgn0250746 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_116708.1 Gene:PRE4 / 850611 SGDID:S000001946 Length:266 Species:Saccharomyces cerevisiae


Alignment Length:248 Identity:90/248 - (36%)
Similarity:142/248 - (57%) Gaps:19/248 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 TTMGPYGTKHSTASST----------TGTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKV 94
            :|.|.|.|:.:.|.::          |||||:.::||:||::|||.|.||||:.|:..:||:..|
Yeast    14 STYGAYNTQIANAGASPMVNTQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPV 78

  Fly    95 NKNILLGGSGDFADIQSIKR----NIDQKMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPL 155
            ..|.::|.|||.:|:|.|:|    .:.:...::...|....::|..:..::..|:|.|||:||||
Yeast    79 GDNTVVGISGDISDMQHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPL 143

  Fly   156 YIDVVVGGVDNEGTPYLANVDLRGRSYEDYVVATGFARHLAVPLVREKKPKDRDF--TAVE-ASE 217
            :..::|.||.:.|..:|..|:|.|.:|....:||||..|:|.||:|:...::.|.  |.|: |.|
Yeast   144 WNAIIVAGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEE 208

  Fly   218 LIRTCMEVLYYRDTRNISQYTVGVCSVN-GCGVEGPFQV-NENWTFAETIKGY 268
            .|...|.||||||.|:...:::.:...| |...:...|| |..|.||:.||||
Yeast   209 AIVNAMRVLYYRDARSSRNFSLAIIDKNTGLTFKKNLQVENMKWDFAKDIKGY 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta7NP_649529.1 proteasome_beta_type_4 60..252 CDD:239729 71/199 (36%)
PRE4NP_116708.1 proteasome_beta_type_4 40..236 CDD:239729 73/195 (37%)

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